LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4753g00003	ATGGGAGGTCTTCAATTCCCTAGAGTTCATACCTCTCTGTTTCTTCCTCTTTTTCTCGTTCAGTTGGCATGGTTTCAGTCTCCCTCATCGGCATACACCGTCCCCGATAAGTATTTTATCAGCTGTGGGTCAAATAACAACGTAACAGACACAGAAAGTGGTCGGGTTTTCGCGGGGGATTCTTCTCTTTCCTTGTCCTTTCCAAAGCAGAGTAGCGCCGTGGAAGCGGGCACTCAGTCATCGGCCGTATCTCCTATCTACCAAACGGCAAGGGTCTTCCAACAGAAATTCTCGTACGAATTCACAACAGACACTTCTGGCTCTTATCTGGTACGCCTTCATTTCTTTGCTTTCCATTCCTCAAGCAATCTCCCCTCTGCTCGCTTTAATGTTTCGGTTCCTGGGTTCTGGCTCTTGCAAAATTTCGCTGCCAAAAATGCTAGCAATTCTCCTTTAGTGAAAGAATTCTTCATAAGCATCAATGCCACCGACTTCAAAATCACTTTCAGGCCTCTGGAATCATCATTTGCATTTGTTAATGCCATAGAACTCTTCCTTCTCCCCGATAATTTCATTCTAGATTATGTTCCGACCGTGACACCCAGTGGCGATTCTGCGAATTACGCGGGTTTGCAGTCTCGGGGGTTACAGATGACTTACAGGCTTAATGTTGGGGGCCCTAATGTCTCAAGAAGCCAGGATGAACTTTTTAGATTCTGGGAAATAGACGATCCTTATTTGTCTAACCCGCGGGCTGCTGATACTAACAGGTCCACTGTTGATATTGCATACCGGGACGTAAATTCTGAATCTGATACTTATTGGGCTACCAAGTATACTGCCCCGAACAGTGTTTACCTAAGTGACAAAAAGGTTCATTTGAATGCCAATGCTTCTGCCTCTGATTTCCTTAACATAACCTGGGGTCTTGCTGTAGAAAAGAAAGCTAATTATCTTGTTCGGGTTCACTTCTGTGACTTGGAGAGTTCTTCTCCTAATCTTACATACTTCAATCTATTCATCTACAACAACTCCCGCTCAATGATCAATTCCATCAACATATCTAACCAGTTGCCTGTTCCATTTTATTATGATTATGTGGTCAATACTGATGCCTCTGGATTCGTGACTATCAGCATAGCACCTCTTCCTTCTCCAGTTCCAAATACGTATCTGAACGGCCTAGAAATTATGAGAATTATTGATTCTTCAAATTCCGTACCGTTGGAGGAATCAAATGTGAATAAGCATCTCCCTCTCGTGTTGGGTTTATCGCTTGGAGTTGGAGGTTCCGTCCTAATTTCTATTATACTGGTTGGGCTAATTTGGCGGGCGAAGTTTATGAAGCAAGAACCCAAGCCTGTTGATAATCCAGACTGGTTACCATTGCCGTTTTATGGAGGAGGAAGTTCTCACAGCAGATTGACTGAAGAAACTTCCCATGGCTCTCCTCTTCCAAACTTAAATCTTGGGCTCAAAATCCCTTTCGTTGAGATCCAATCTGCAACCAACAACTTTGATACAAAAAGATTAATTGGAAAGGGCGGTTTTGGCAACGTTTACAAGGGAGTTCTCAGGAATGGTTTGAGAGTGGCTGTGAAAAGAAGTGAGCCTGGGTCAGGACAAGGCCTTCCAGAATTCCAGACAGAGATTATGGTTCTGTCCAAAATTCGACACAGGCACCTTGTTTCCTTGATTGGGTATTGTGATGAAAGGTCTGAAATGATTTTAGTTTATGAATATATGGAAAAAGGGACACTGAGGGATCATTTGTACAATTCAAATCTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAGATTTGCATTGGAGCTGCGGGGGGTCTTCATTACCTTCACAAAGGAGCATCAGGGGGCATCATTCACCGAGACGTTAAGTCTACAAATATATTGCTTGATGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTCTCAAGAACAGGCCCTCTTGATCATCAACCTTATGTCAGCACCGGTGTTAAAGGCACCTTTGGGTATCTAGATCCTGAGTATTTTCGGTCACAACAGTTAACAGAAAAATCTGATGTTTACTCATTTGGCGTGGTACTTCTTGAAGTGTTATGTGCAAGACCAGCCATTGAACCTATGCTGCCACGGGAGCAGGTGAACTTGGCTGAATGGGGACTCCTTTGCAAAAACAAAGGAATGCTCCAAGAGATTATAGATCCTTCCATCAAGGGGCAAATAGATCCAAACTCACTCAGGAAATTTAGCGAGACAGTGGAGAAATGTTTACAAGAAGATGGCTCTGATAGGCCTAGCATGGGTGACGTATTGTGGGACCTGGAGTATGCACTACAGCTTCAGCGAGGCTCAATTCAGAGAGAACCCCATGAGGACAGCTCTAGTGGTGCTTCTGCATCAATTCAACTGCCCAGTGTTCGTCGACTTCCTTCACTTTCTACACTTGGTGAATCAGGTGATATGTCCATGGTAAGGGAAGACGAATCTGATAACACAGTGGGTTCAGTTTTCTCACAGTTGAAAATTGATGATGCGAGATAG	2547	0.4393	MGGLQFPRVHTSLFLPLFLVQLAWFQSPSSAYTVPDKYFISCGSNNNVTDTESGRVFAGDSSLSLSFPKQSSAVEAGTQSSAVSPIYQTARVFQQKFSYEFTTDTSGSYLVRLHFFAFHSSSNLPSARFNVSVPGFWLLQNFAAKNASNSPLVKEFFISINATDFKITFRPLESSFAFVNAIELFLLPDNFILDYVPTVTPSGDSANYAGLQSRGLQMTYRLNVGGPNVSRSQDELFRFWEIDDPYLSNPRAADTNRSTVDIAYRDVNSESDTYWATKYTAPNSVYLSDKKVHLNANASASDFLNITWGLAVEKKANYLVRVHFCDLESSSPNLTYFNLFIYNNSRSMINSINISNQLPVPFYYDYVVNTDASGFVTISIAPLPSPVPNTYLNGLEIMRIIDSSNSVPLEESNVNKHLPLVLGLSLGVGGSVLISIILVGLIWRAKFMKQEPKPVDNPDWLPLPFYGGGSSHSRLTEETSHGSPLPNLNLGLKIPFVEIQSATNNFDTKRLIGKGGFGNVYKGVLRNGLRVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYNSNLPSLPWKQRLEICIGAAGGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPMLPREQVNLAEWGLLCKNKGMLQEIIDPSIKGQIDPNSLRKFSETVEKCLQEDGSDRPSMGDVLWDLEYALQLQRGSIQREPHEDSSSGASASIQLPSVRRLPSLSTLGESGDMSMVREDESDNTVGSVFSQLKIDDAR	848

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4753g00003	848	ProSiteProfiles	Protein kinase domain profile.	506	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4753g00003	848	FunFam	Receptor-like protein kinase FERONIA	582	798	-	-
	Pral4753g00003	848	SUPERFAMILY	Protein kinase-like (PK-like)	486	777	IPR011009	-
	Pral4753g00003	848	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	626	638	IPR008271	GO:0004672\|GO:0006468
	Pral4753g00003	848	MobiDBLite	consensus disorder prediction	786	848	-	-
	Pral4753g00003	848	CDD	STKc_IRAK	512	777	-	-
	Pral4753g00003	848	Pfam	Malectin-like domain	40	399	IPR024788	-
	Pral4753g00003	848	Gene3D	Transferase(Phosphotransferase) domain 1	582	799	-	-
	Pral4753g00003	848	MobiDBLite	consensus disorder prediction	792	820	-	-
	Pral4753g00003	848	ProSitePatterns	Protein kinases ATP-binding region signature.	512	534	IPR017441	GO:0005524
	Pral4753g00003	848	SMART	serkin_6	506	779	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4753g00003	848	PANTHER	OS07G0166700 PROTEIN	493	783	IPR045272	GO:0004714\|GO:0006468
	Pral4753g00003	848	Gene3D	Phosphorylase Kinase; domain 1	471	581	-	-
	Pral4753g00003	848	FunFam	receptor-like protein kinase FERONIA	470	581	-	-
	Pral4753g00003	848	FunFam	Putative receptor-like protein kinase	37	188	-	-
	Pral4753g00003	848	Pfam	Protein tyrosine and serine/threonine kinase	508	773	IPR001245	GO:0004672\|GO:0006468
	Pral4753g00003	848	Gene3D	-	37	186	-	-
	Pral4753g00003	848	Gene3D	-	216	400	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4753g00003	Pral-Chr4753	13854	18556	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4753g00003	12	848	Receptor kinase-like Gene Family	AT2G23200	45.285	0.0	672

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral4753g00003		Malectin_like	1.1e-35	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4753g00003	-		-	qsa:O6P43_033868	942.954