Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00115 ATGGAGACTGTCCCAAACTTACTGCCGGCGACCCAATTTCAGTCACTTGTATTCTACAGAGGAGCCAAGAGTATGGGATTCTCCAAATCCCTTCTCCACCAACCCTCCTTCTCTTACTATTCGACTTTAGGCAGCCGCTTTGCTTCTCGTAAGCTTCAGAGGCTTCATCGCCGCCCTCTGCCTTGTGTTGCTGAAGCCAGCACTGATCACCACCACCACAGCGCTCTAACCCAGCGCGATCACCACGACCACCACAGCGATCAAGCTCACCATGACCATCACGGCTGCCACAACCACCATCACTCACACGGCAGCGATTCTGCGAATCTTACCGGACCTCAAAAAGCTATTCTCAGGTTCGCCAAAGCCACCAGATGGATAGACGTGGCAGATTTCTTGAGAGAACATTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGCCATTTGCCCCCATACCTTGCCTAAGCCCATCATCAAGCCTGTTCAAAATACTCTCATTTTCATCGCTTTTCCTTTAGTTGGGGTTCCTGCATCACTTGACGCGCTTGTCGAAATTGGCAGTGGAAAAGTAAATATCCATGTGTTGATGGCTCTGGCAGCCTTTGCGTCCCTATTTATGGGGAATTCTTTGGAGGGAGGATTGCTTCTTGCCATGTTTAATCTGGCCCATATAGCTGAGGAGTACTTCACCAGCCGTTCAATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGCCCTTGTGCTGGAAACTGACAGTGACGATGAACTCCCTAATACCTTTGATTTGGCGTATAAGAGGGTTCCTGTGCATGATGTAACTGTAGGCTCATATATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACGATTACCATTGAGCATCTGACTGGAGAAGTCAAACCATTGGAGGCTGGAGTTGGCGACAGGGTTCCTGGAGGTGCAAGGAATTTAGATGGGAGAATAATTATAAGGGCAACAAAGACTTGGAAGGAATCAACTCTTAACAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAACAATACAGCAAAGTTGTTGTGGTGCTATCAGTTGCTATTGCTGTCATTGGGCCACTCATATTTAAGTGGCCCTTTATTAGTACATCAGCTTGCAGAGGTTCAATTTATAGAGCCTTGGGCCTTATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTAGCTCCATTGGCATACGCTACAGCAATCAGCTCCTGTGCCAAAAAGGGGATATTGCTAAAAGGTGGACATGTTCTAGATGCTCTATCTTCTTGCCGTACAATAGCATTTGACAAAACAGGGACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTATGGTCATAAAGTTACAAATAACATAACAAAAATTCCTTCCTGTTGTATTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTCGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGACTTGTTGCTACTCTCAACAGCATTGAGTCAGAAACTGGAGGAGCCAAACTTTTAAAAGCATCACTTGGATCTGTGGATTTCATCACCTCATTATGTCAATCTGAAGTCGAGTCTAAAAGGATCAAAGAAGCAGTTAATGCATCTTCTTATGGAAGTGAATTTGTTCATGCTGCCCTCTCAGTTGACAAAAAGGTAACACTGATCCACTTAGAGGATAGACCTCGGCCTGGGGTTTCTAATGTCATACAGGAATTGCAAGACGAAGCAAACTTTCGTGTGATGATGTTAACTGGTGACCACGATTCCAGTGCAAGAAGAGTTGCAGGTGCTGTAGGCATCAATGAGGTTTATTGCAACCTTAAGCCTGAAGATAAGTTGAGCCATGTGAAGGATATCTCGAGGGACATGGGGGGAGGCCTAATCATGGTTGGTGAGGGGATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAGTCTCGCCAAACAACCTCACTGATTAAACAAAATGTGGCCCTGGCATTGTCCAGCATTTTCATGGCGTCTCTTCCTTCGGTCTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTGTTACATGAAGGTGGAACCCTGCTTGTTTGCCTAAATTCCATACGTGGTTTACGTGAGCCAGCTTGGTCATGGAAGCAGGATGTGCTTCAGTTGATAAACAAAGTAAAATCTAGACTTCTGCCACTTACGACAAACAACACTAGCTCGAGCGCCTTGGACACCGCAAATTTGTGA 2514 0.4578 METVPNLLPATQFQSLVFYRGAKSMGFSKSLLHQPSFSYYSTLGSRFASRKLQRLHRRPLPCVAEASTDHHHHSALTQRDHHDHHSDQAHHDHHGCHNHHHSHGSDSANLTGPQKAILRFAKATRWIDVADFLREHLHLCCCSTALFVAAAICPHTLPKPIIKPVQNTLIFIAFPLVGVPASLDALVEIGSGKVNIHVLMALAAFASLFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPDFALVLETDSDDELPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEAGVGDRVPGGARNLDGRIIIRATKTWKESTLNRIVQLTEEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCRTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKIPSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLVATLNSIESETGGAKLLKASLGSVDFITSLCQSEVESKRIKEAVNASSYGSEFVHAALSVDKKVTLIHLEDRPRPGVSNVIQELQDEANFRVMMLTGDHDSSARRVAGAVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRGLREPAWSWKQDVLQLINKVKSRLLPLTTNNTSSSALDTANL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00115 837 MobiDBLite consensus disorder prediction 67 104 - -
Pral4752g00115 837 Gene3D - 456 744 IPR023214 -
Pral4752g00115 837 PRINTS P-type cation-transporting ATPase superfamily signature 616 627 - -
Pral4752g00115 837 PRINTS P-type cation-transporting ATPase superfamily signature 106 120 - -
Pral4752g00115 837 PRINTS P-type cation-transporting ATPase superfamily signature 693 712 - -
Pral4752g00115 837 PRINTS P-type cation-transporting ATPase superfamily signature 639 649 - -
Pral4752g00115 837 PRINTS P-type cation-transporting ATPase superfamily signature 717 729 - -
Pral4752g00115 837 NCBIfam HAD-IC family P-type ATPase 596 773 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4752g00115 837 NCBIfam HAD-IC family P-type ATPase 271 490 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4752g00115 837 SUPERFAMILY Calcium ATPase, transduction domain A 271 356 IPR008250 -
Pral4752g00115 837 Pfam E1-E2 ATPase 271 443 - -
Pral4752g00115 837 Pfam haloacid dehalogenase-like hydrolase 460 706 - -
Pral4752g00115 837 SUPERFAMILY Calcium ATPase, transmembrane domain M 198 457 IPR023298 -
Pral4752g00115 837 SUPERFAMILY HAD-like 461 793 IPR036412 -
Pral4752g00115 837 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Pral4752g00115 837 SFLD p-type atpase 445 746 IPR044492 -
Pral4752g00115 837 NCBIfam heavy metal translocating P-type ATPase 196 795 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pral4752g00115 837 Gene3D - 235 361 - -
Pral4752g00115 837 MobiDBLite consensus disorder prediction 67 108 - -
Pral4752g00115 837 Gene3D - 474 624 IPR023299 GO:0000166
Pral4752g00115 837 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 51 835 - -
Pral4752g00115 837 SFLD Haloacid Dehalogenase 445 746 - -
Pral4752g00115 837 CDD P-type_ATPase_HM 172 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00115 Pral-Chr4752 544518 553853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00115 113 818 Primary Pumps ATPases AT4G37270 76.912 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00115 K01534 - gmx:100776309 1285.4