Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00114 ATGGAGACTGTCCCAAACTTACTGCCGGCGACCCAATTTCAGTCACTTGTATTCTACAGAGGAGCCAAGAGTATGGGATTCTCCAAATCCCTTCTCCACCAACCCTCCTTCTCTTACTATTCGACTTTAGGCAGCCGCTTTGCTTCTCGTAAGCTTCAGAGGCTTCATCGCCGCCCTCTGCCTTGTGTTGCTGAAGCCAGCACTGATCACCACCACCACAGCGCTCTAACCCAGCGCGATCACCACGACCACCACAGCGATCAAGCTCACCATGACCATCACGGCTGCCACAACCACCATCACTCACACGGCAGCGATTCTGCGAATCTTACCGGACCTCAAAAAGCTATTCTCAGGTTCGCCAAAGCCACCAGATGGATAGACGTGGCAGATTTCTTGAGAGAACATTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGCCATTTGCCCCCATACCTTGCCTAAGCCCATCATCAAGCCTGTTCAAAATACTCTCATTTTCATCGCTTTTCCTTTAGTTGGGGTTCCTGCATCACTTGACGCGCTTGTCGAAATTGGCAGTGGAAAAGTAAATATCCATGTGTTGATGGCTCTGGCAGCCTTTGCGTCCCTATTTATGGGGAATTCTTTGGAGGGAGGATTGCTTCTTGCCATGTTTAATCTGGCCCATATAGCTGAGGAGTACTTCACCAGCCGTTCAATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGCCCTTGTGCTGGAAACTGACAGTGACGATGAACTCCCTAATACCTTTGATTTGGCGTATAAGAGGGTTCCTGTGCATGATGTAACTGTAGGCTCATATATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACGATTACCATTGAGCATCTGACTGGAGAAGTCAAACCATTGGAGGCTGGAGTTGGCGACAGGGTTCCTGGAGGTGCAAGGAATTTAGATGGGAGAATAATTATAAGGGCAACAAAGACTTGGAAGGAATCAACTCTTAACAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAACAATACAGCAAAGTTGTTGTGGTGCTATCAGTTGCTATTGCTGTCATTGGGCCACTCATATTTAAGTGGCCCTTTATTAGTACATCAGCTTGCAGAGGTTCAATTTATAGAGCCTTGGGCCTTATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTAGCTCCATTGGCATACGCTACAGCAATCAGCTCCTGTGCCAAAAAGGGGATATTGCTAAAAGGTGGACATGTTCTAGATGCTCTATCTTCTTGCCGTACAATAGCATTTGACAAAACAGGGACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTATGGTCATAAAGTTACAAATAACATAACAAAAATTCCTTCCTGTTGTATTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTCGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGACTTGTTGCTACTCTCAACAGCATTGAGGTAACACTGATCCACTTAGAGGATAGACCTCGGCCTGGGGTTTCTAATGTCATACAGGAATTGCAAGACGAAGCAAACTTTCGTGTGATGATGTTAACTGGTGACCACGATTCCAGTGCAAGAAGAGTTGCAGGTGCTGTAGGCATCAATGAGGTTTATTGCAACCTTAAGCCTGAAGATAAGTTGAGCCATGTGAAGGATATCTCGAGGGACATGGGGGGAGGCCTAATCATGGTTGGTGAGGGGATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAGTCTCGCCAAACAACCTCACTGATTAAACAAAATGTGGCCCTGGCATTGTCCAGCATTTTCATGGCGTCTCTTCCTTCGGTCTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTGTTACATGAAGGTGGAACCCTGCTTGTTTGCCTAAATTCCATACGTGGTTTACGTGAGCCAGCTTGGTCATGGAAGCAGGATGTGCTTCAGTTGATAAACAAAGTAAAATCTAGACTTCTGCCACTTACGACAAACAACACTAGCTCGAGCGCCTTGGACACCGCAAATTTGTGA 2349 0.4628 METVPNLLPATQFQSLVFYRGAKSMGFSKSLLHQPSFSYYSTLGSRFASRKLQRLHRRPLPCVAEASTDHHHHSALTQRDHHDHHSDQAHHDHHGCHNHHHSHGSDSANLTGPQKAILRFAKATRWIDVADFLREHLHLCCCSTALFVAAAICPHTLPKPIIKPVQNTLIFIAFPLVGVPASLDALVEIGSGKVNIHVLMALAAFASLFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPDFALVLETDSDDELPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEAGVGDRVPGGARNLDGRIIIRATKTWKESTLNRIVQLTEEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCRTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKIPSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLVATLNSIEVTLIHLEDRPRPGVSNVIQELQDEANFRVMMLTGDHDSSARRVAGAVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRGLREPAWSWKQDVLQLINKVKSRLLPLTTNNTSSSALDTANL 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00114 782 CDD P-type_ATPase_HM 172 740 - -
Pral4752g00114 782 MobiDBLite consensus disorder prediction 67 104 - -
Pral4752g00114 782 SUPERFAMILY Calcium ATPase, transmembrane domain M 198 457 IPR023298 -
Pral4752g00114 782 SUPERFAMILY Calcium ATPase, transduction domain A 271 356 IPR008250 -
Pral4752g00114 782 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 51 559 - -
Pral4752g00114 782 NCBIfam HAD-IC family P-type ATPase 271 718 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4752g00114 782 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Pral4752g00114 782 SUPERFAMILY HAD-like 461 738 IPR036412 -
Pral4752g00114 782 Gene3D - 474 560 IPR023299 GO:0000166
Pral4752g00114 782 Gene3D - 570 689 IPR023214 -
Pral4752g00114 782 Gene3D - 456 473 IPR023214 -
Pral4752g00114 782 MobiDBLite consensus disorder prediction 67 108 - -
Pral4752g00114 782 Gene3D - 235 361 - -
Pral4752g00114 782 Pfam haloacid dehalogenase-like hydrolase 460 553 - -
Pral4752g00114 782 Pfam E1-E2 ATPase 271 443 - -
Pral4752g00114 782 PRINTS P-type cation-transporting ATPase superfamily signature 662 674 - -
Pral4752g00114 782 PRINTS P-type cation-transporting ATPase superfamily signature 106 120 - -
Pral4752g00114 782 PRINTS P-type cation-transporting ATPase superfamily signature 561 572 - -
Pral4752g00114 782 PRINTS P-type cation-transporting ATPase superfamily signature 584 594 - -
Pral4752g00114 782 PRINTS P-type cation-transporting ATPase superfamily signature 638 657 - -
Pral4752g00114 782 Pfam haloacid dehalogenase-like hydrolase 561 651 - -
Pral4752g00114 782 NCBIfam cadmium family heavy metal-translocating P-type ATPase 196 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00114 Pral-Chr4752 544518 553854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00114 113 763 Primary Pumps ATPases AT4G37270 71.955 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00114 K01534 - gmx:100776309 1157.9