Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00113 ATGGAGACTGTCCCAAACTTACTGCCGGCGACCCAATTTCAGTCACTTGTATTCTACAGAGGAGCCAAGAGTATGGGATTCTCCAAATCCCTTCTCCACCAACCCTCCTTCTCTTACTATTCGACTTTAGGCAGCCGCTTTGCTTCTCGTAAGCTTCAGAGGCTTCATCGCCGCCCTCTGCCTTGTGTTGCTGAAGCCAGCACTGATCACCACCACCACAGCGCTCTAACCCAGCGCGATCACCACGACCACCACAGCGATCAAGCTCACCATGACCATCACGGCTGCCACAACCACCATCACTCACACGGCAGCGATTCTGCGAATCTTACCGGACCTCAAAAAGCTATTCTCAGGTTCGCCAAAGCCACCAGATGGATAGACGTGGCAGATTTCTTGAGAGAACATTTGCATTTATGCTGCTGTTCAACGGCTTTATTTGTGGCTGCTGCCATTTGCCCCCATACCTTGCCTAAGCCCATCATCAAGCCTGTTCAAAATACTCTCATTTTCATCGCTTTTCCTTTAGTTGGGGTTCCTGCATCACTTGACGCGCTTGTCGAAATTGGCAGTGGAAAAGTAAATATCCATGTGTTGATGGCTCTGGCAGCCTTTGCGTCCCTATTTATGGGGAATTCTTTGGAGGGAGGATTGCTTCTTGCCATGTTTAATCTGGCCCATATAGCTGAGGAGTACTTCACCAGCCGTTCAATGATTGATGTTAAAGAGTTGAAGGACAATAATCCAGATTTTGCCCTTGTGCTGGAAACTGACAGTGACGATGAACTCCCTAATACCTTTGATTTGGCGTATAAGAGGGTTCCTGTGCATGATGTAACTGTAGGCTCATATATCTTGGTTGGAGCTGGTGAGTCTGTGCCTGTAGATTGTGAAGTTTTCAAAGGCAGTGCTACGATTACCATTGAGCATCTGACTGGAGAAGTCAAACCATTGGAGGCTGGAGTTGGCGACAGGGTTCCTGGAGGTGCAAGGAATTTAGATGGGAGAATAATTATAAGGTTGACTGAAGAAGCACAGTTGAATAGACCAAAGCTTCAAAGGTGGCTGGATGAATTTGGTGAACAATACAGCAAAGTTGTTGTGGTGCTATCAGTTGCTATTGCTGTCATTGGGCCACTCATATTTAAGTGGCCCTTTATTAGTACATCAGCTTGCAGAGGTTCAATTTATAGAGCCTTGGGCCTTATGGTGGCTGCGTCTCCATGTGCCTTGGCTGTAGCTCCATTGGCATACGCTACAGCAATCAGCTCCTGTGCCAAAAAGGGGATATTGCTAAAAGGTGGACATGTTCTAGATGCTCTATCTTCTTGCCGTACAATAGCATTTGACAAAACAGGGACACTGACAACTGGTGGACTTGTATTCAAGGCAATTGAACCAATTTATGGTCATAAAGTTACAAATAACATAACAAAAATTCCTTCCTGTTGTATTCCTAGCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCTGCCATGGAAAAGGGTACCACTCACCCCATTGGAAGGGCAGTTGTCGACCACAGTGAGGGGAAAGACCTCCCATCTGTTTCTGTTGAAAGTTTTGAGTATTTTCCTGGTAGAGGACTTGTTGCTACTCTCAACAGCATTGAGTCAGAAACTGGAGGAGCCAAACTTTTAAAAGCATCACTTGGATCTGTGGATTTCATCACCTCATTATGTCAATCTGAAGTCGAGTCTAAAAGGATCAAAGAAGCAGTTAATGCATCTTCTTATGGAAGTGAATTTGTTCATGCTGCCCTCTCAGTTGACAAAAAGGTAACACTGATCCACTTAGAGGATAGACCTCGGCCTGGGGTTTCTAATGTCATACAGGAATTGCAAGACGAAGCAAACTTTCGTGTGATGATGTTAACTGGTGACCACGATTCCAGTGCAAGAAGAGTTGCAGGTGCTGTAGGCATCAATGAGGTTTATTGCAACCTTAAGCCTGAAGATAAGTTGAGCCATGTGAAGGATATCTCGAGGGACATGGGGGGAGGCCTAATCATGGTTGGTGAGGGGATTAATGATGCCCCAGCACTTGCTGCTGCAACAGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCAACTGCCATAGCAGTTGCAGATGTGCTGTTGCTTCGGGAAAATATTTCTGCAGTACCATTTTGTATTGCCAAGTCTCGCCAAACAACCTCACTGATTAAACAAAATGTGGCCCTGGCATTGTCCAGCATTTTCATGGCGTCTCTTCCTTCGGTCTTGGGATTTTTGCCCTTGTGGTTAACGGTTCTGTTACATGAAGGTGGAACCCTGCTTGTTTGCCTAAATTCCATACGTGGTTTACGTGAGCCAGCTTGGTCATGGAAGCAGGATGTGCTTCAGTTGATAAACAAAGTAAAATCTAGACTTCTGCCACTTACGACAAACAACACTAGCTCGAGCGCCTTGGACACCGCAAATTTGTGA 2469 0.4589 METVPNLLPATQFQSLVFYRGAKSMGFSKSLLHQPSFSYYSTLGSRFASRKLQRLHRRPLPCVAEASTDHHHHSALTQRDHHDHHSDQAHHDHHGCHNHHHSHGSDSANLTGPQKAILRFAKATRWIDVADFLREHLHLCCCSTALFVAAAICPHTLPKPIIKPVQNTLIFIAFPLVGVPASLDALVEIGSGKVNIHVLMALAAFASLFMGNSLEGGLLLAMFNLAHIAEEYFTSRSMIDVKELKDNNPDFALVLETDSDDELPNTFDLAYKRVPVHDVTVGSYILVGAGESVPVDCEVFKGSATITIEHLTGEVKPLEAGVGDRVPGGARNLDGRIIIRLTEEAQLNRPKLQRWLDEFGEQYSKVVVVLSVAIAVIGPLIFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALSSCRTIAFDKTGTLTTGGLVFKAIEPIYGHKVTNNITKIPSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVESFEYFPGRGLVATLNSIESETGGAKLLKASLGSVDFITSLCQSEVESKRIKEAVNASSYGSEFVHAALSVDKKVTLIHLEDRPRPGVSNVIQELQDEANFRVMMLTGDHDSSARRVAGAVGINEVYCNLKPEDKLSHVKDISRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADVLLLRENISAVPFCIAKSRQTTSLIKQNVALALSSIFMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSIRGLREPAWSWKQDVLQLINKVKSRLLPLTTNNTSSSALDTANL 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00113 822 MobiDBLite consensus disorder prediction 67 104 - -
Pral4752g00113 822 Pfam haloacid dehalogenase-like hydrolase 445 691 - -
Pral4752g00113 822 Gene3D - 235 348 - -
Pral4752g00113 822 NCBIfam heavy metal translocating P-type ATPase 196 780 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pral4752g00113 822 SUPERFAMILY Calcium ATPase, transduction domain A 271 342 IPR008250 -
Pral4752g00113 822 MobiDBLite consensus disorder prediction 67 108 - -
Pral4752g00113 822 SFLD Haloacid Dehalogenase 430 731 - -
Pral4752g00113 822 SUPERFAMILY HAD-like 446 778 IPR036412 -
Pral4752g00113 822 SFLD p-type atpase 430 731 IPR044492 -
Pral4752g00113 822 CDD P-type_ATPase_HM 172 780 - -
Pral4752g00113 822 ProSitePatterns E1-E2 ATPases phosphorylation site. 450 456 IPR018303 -
Pral4752g00113 822 Gene3D - 441 729 IPR023214 -
Pral4752g00113 822 PRINTS P-type cation-transporting ATPase superfamily signature 601 612 - -
Pral4752g00113 822 PRINTS P-type cation-transporting ATPase superfamily signature 624 634 - -
Pral4752g00113 822 PRINTS P-type cation-transporting ATPase superfamily signature 678 697 - -
Pral4752g00113 822 PRINTS P-type cation-transporting ATPase superfamily signature 106 120 - -
Pral4752g00113 822 PRINTS P-type cation-transporting ATPase superfamily signature 702 714 - -
Pral4752g00113 822 NCBIfam HAD-IC family P-type ATPase 271 475 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4752g00113 822 NCBIfam HAD-IC family P-type ATPase 581 758 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4752g00113 822 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 52 820 - -
Pral4752g00113 822 Pfam E1-E2 ATPase 271 428 - -
Pral4752g00113 822 Gene3D - 459 609 IPR023299 GO:0000166
Pral4752g00113 822 SUPERFAMILY Calcium ATPase, transmembrane domain M 198 442 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00113 Pral-Chr4752 544518 553854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00113 113 803 Primary Pumps ATPases AT4G37270 75.354 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00113 K01534 - gmx:100776309 1251.88