Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00112 ATGAATACGGTTGCCGTCAGGAAGGATATGGACCGGATTAAGGGTCCCTGGAGCCCCGAAGAGGACGAGGCCTTACACAAGCTCGTCGAGAAGCATGGCCCCAGGAACTGGTCCTTGATCAGCAAGTCCATTCCCGGTCGATCCGGCAAGTCCTGCAGGCTTCGCTGGTGCAATCAGCTCTCCCCTCAGGTCGAGCACCGAGCATTCACGCCCGAGGAGGATGAGACCATCATCAGGGCTCATGCCCGTTTCGGTAATAAATGGGCCACCATCGCTCGCCTGCTCTCCGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTAAAGCGCAAGTGTGCATCCATGATGATCGATGACGCCGCTGCTGTCGGTGGATTCGATGGCAGTTTCAGCCCGCAGCCACTTAAGAGGTCGGTCAGTGCCGGCGCCGCTGTACCCGTATCCACTGGGCTGTGCATGAACCCGCCCACGCCGGGAAGCCCTTCTGGATCGGATGTGAGCGAGTCCAGTGTTCCCGTTGCGTCTTGTTCTCAAGTCTATCGACCTGTACCGAGAACCGGCGGGCTTCTACCTCCCGTAGAAACGACGTCTTCTTCCAATGACCCTCCCACGTCATTATCCCTGTCTCTTCCGGGCGTAGACTCTTCTGAAGTCTCCAATCGGCCTGCAGACCCAACACATGCTGCACCACCGACCAACAGTACGCGCTTGTTACCCGTAATGGCGCCGACGCCAGCTCCAGCTTTCCCGCCTGCCCCACCCCCGGCTCCGGCGTCTGCTCCGATGTCGATGCCTCAGCAGGTTCAGTTGGGTAGGGATGATCGAAGGGGCGAGAGGGGTCGGAATCAGAATGGGTTATTAGCTTTCAATTTCAGTGCAGATTTGCTGGCTGTGATGCAAGACATGATAAGGAAGGAGGTGAGGAATTATATGGCGGGGTTGGAGCAGCAGAATGGGGTGTGTTTTCAGGCAGCTGATGGATTTCGAAACGCTTCGGTGAAGCGTATTGGAATTAGCAGGATCGATTCATGA 1041 0.5677 MNTVAVRKDMDRIKGPWSPEEDEALHKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIDDAAAVGGFDGSFSPQPLKRSVSAGAAVPVSTGLCMNPPTPGSPSGSDVSESSVPVASCSQVYRPVPRTGGLLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRPADPTHAAPPTNSTRLLPVMAPTPAPAFPPAPPPAPASAPMSMPQQVQLGRDDRRGERGRNQNGLLAFNFSADLLAVMQDMIRKEVRNYMAGLEQQNGVCFQAADGFRNASVKRIGISRIDS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00112 346 SMART sant 13 62 IPR001005 -
Pral4752g00112 346 SMART sant 65 113 IPR001005 -
Pral4752g00112 346 MobiDBLite consensus disorder prediction 194 242 - -
Pral4752g00112 346 PANTHER MYB PROTEIN-RELATED 14 217 - -
Pral4752g00112 346 CDD SANT 68 111 IPR001005 -
Pral4752g00112 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Pral4752g00112 346 Gene3D - 67 125 - -
Pral4752g00112 346 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Pral4752g00112 346 FunFam Transcription factor MYB44 68 114 - -
Pral4752g00112 346 Gene3D - 13 65 - -
Pral4752g00112 346 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral4752g00112 346 FunFam MYB transcription factor 14 65 - -
Pral4752g00112 346 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Pral4752g00112 346 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Pral4752g00112 346 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Pral4752g00112 346 MobiDBLite consensus disorder prediction 246 264 - -
Pral4752g00112 346 MobiDBLite consensus disorder prediction 185 284 - -
Pral4752g00112 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Pral4752g00112 346 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00112 Pral-Chr4752 541430 542979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00112 6 345 MYB Transcription Factor Family AT4G37260 48.603 5.80e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4752g00112 Myb_DNA-binding 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00112 K09422 - qsa:O6P43_024595 488.419