Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00103 ATGGCTCTCAGGGAAGAAGCCCAAGATTTGCAGGACTCTTCGTTATTCCTCGACGCGCTCCTCTGTGAGGAGCATGGCTTCGACCAAGAATCTGCTGAGGAGGAGGAGGTTCATGACTCCGATTCGGCCGTTAGAGATCCCTCATCTTTACCCTTGAATTTGTTGGAAAATGACTTGTTCTGGGAAGATGCTGAGCTTGTTTCCCTTATCTCTAAGGAGGGAGAAACTCATTTAAATTTAGACAGTCTAATTGCCGACGAGCCTCTGCAGAAAGCTCGCGAGGACGCTGTGAGATGGATTTCAAAAGTTTGTGCGCACTATGGTTTCTCTACTTTGACCACTGTTCTCTCTGTGAACTACTTCGATAGGTTCGTCATGAGCCTCACGTTTCAGAAGGATAAGCCCTGGATGACTCAGCTCGCTGCAGTTGCCTGTTTAGCTCTGGCTGCCAAAGTGGAAGAGATCCGAGTCCCTCTTCTTTTGGACCTGCAAGTGGAGCAATCGAAGTACTTGTTTGAAGCAAAGACAATACAGAGAATGGAGCTCCTGGTATTATCAACTCTTAACTGGAGGATGAACCCGGTGACTCCAATCTCCTTCTTTGAACTTATTGTCAGAATGCTGGGCCTAAAGAGCCGCTTGCATTGGGAGTTCTTGTTTCGGTGCCAGCGTGCGCTTCTCTGTCTCATTCTGGATTCAAGGCCTATGAGTTATCGTCCATCTACATTAGCTGTTGCTATAATGATCCACGTTATTAGCGAGGTTGAACCATTAAATGCAATGGAGCACAGACACCAGCTTATGCTTTTACTCAAAATCAATGAGGAACAAGTGAATGAATGTTACAAACTCATTCTGAAGCTATTATGCTGTCATGAAGACATTCAAAATATTAACCCGAAACGCAAGCGTCTGTCCAGCCCAGATGGTGTCATTGATGTGTCTTTCAGCAGTGATTGCGCAGATGACTCGTGGGCTAAGGCATCACCACTCTCATTGTCGCTAGAGCCGATGTTTAAGCGAAGCAGAGCCCTAGAGCAGCCGATGCATTTGCCTTCCGTAAATCGTGTGTCTATTGATGTTCTTCACAGCCCTCGTTAG 1101 0.465 MALREEAQDLQDSSLFLDALLCEEHGFDQESAEEEEVHDSDSAVRDPSSLPLNLLENDLFWEDAELVSLISKEGETHLNLDSLIADEPLQKAREDAVRWISKVCAHYGFSTLTTVLSVNYFDRFVMSLTFQKDKPWMTQLAAVACLALAAKVEEIRVPLLLDLQVEQSKYLFEAKTIQRMELLVLSTLNWRMNPVTPISFFELIVRMLGLKSRLHWEFLFRCQRALLCLILDSRPMSYRPSTLAVAIMIHVISEVEPLNAMEHRHQLMLLLKINEEQVNECYKLILKLLCCHEDIQNINPKRKRLSSPDGVIDVSFSSDCADDSWAKASPLSLSLEPMFKRSRALEQPMHLPSVNRVSIDVLHSPR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00103 366 SMART cyclin_7 98 186 IPR013763 -
Pral4752g00103 366 CDD CYCLIN_AtCycD-like_rpt2 195 285 - -
Pral4752g00103 366 Gene3D - 86 193 - -
Pral4752g00103 366 SUPERFAMILY Cyclin-like 177 297 IPR036915 -
Pral4752g00103 366 FunFam D3-type cyclin 86 193 - -
Pral4752g00103 366 PANTHER CYCLINS 60 287 IPR039361 -
Pral4752g00103 366 Pfam Cyclin, C-terminal domain 195 297 IPR004367 -
Pral4752g00103 366 SMART Cyclin_C_2 195 320 IPR004367 -
Pral4752g00103 366 CDD CYCLIN_AtCycD-like_rpt1 92 190 - -
Pral4752g00103 366 MobiDBLite consensus disorder prediction 28 47 - -
Pral4752g00103 366 Gene3D - 194 283 - -
Pral4752g00103 366 Pfam Cyclin, N-terminal domain 77 193 IPR006671 -
Pral4752g00103 366 SUPERFAMILY Cyclin-like 63 193 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00103 Pral-Chr4752 508474 510445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00103 1 356 Core Cell Cycle Gene Families AT5G67260 47.861 2.35e-102 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00103 K14505 - qsa:O6P43_024601 456.832