Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00099 ATGGCCGTAGAGCTCGTGATGGGTTACAGGAACGACAGTTTCGTGGCCAAAATGGATGATAATGTTGTTCAAGAAGCTGCATCTGGCCTGGAGAGCGTGGAGAAGCTCATCAGGTTGCTTTCTCAGAGTCAGCAACAATTCCAGTCTTCTTCTTCTTCCGCTTCAAAGTCTCCCGTGGAAATTGAGATGGACTGTAAAGCCGTAGCAGACGTCGCCGTTTCCAAGTTCAAGAAGGTGATTTCTCTTCTGGGTCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTTTGGTGCCGCCTCCTCCTCCTCCTAGCGTTAATCAAAACCCTGAGCGACAGCCTCCTGAACCCAAAGTATATTATGCGACGCCGTTGCAGCAGATCCCGCCTGCCCTTCTTCAACACCAAACTCTGGGCGAGCAGCATCCCCTGATCCCCAAAAGTGGGGTGATTGAGAGGAAGGACTCGTTTAAGACCATTAATTTCTCGTATTCCTCTGCCGCGACGTCGTTTATGTCGTCTCTTACTGGCGATACTGATAGTAAACAACCATCCTCGTCGTCGCCGGCGACCGCTTTTCAGATCACGAATCTGTCTCAGGTCTCCTCAGCGGGAAAGCCTCCTCTTTCTTCTTCCTCGTTGAAGAGAAAGTGTAGCTCCGAGAACCTGGGTTCTGGCAGGTGCGGCAGTTCTTCCAGTCGTTGCCATTGTTCTAAAAAGAGAAAAATGAGGTTGAAAAGGGTAGTGAGGGTGCCGGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTACGGACAGAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGCGTTAGAGGGTGTCCGGCGCGCAAACACGTAGAGCGAGCTCTGGACGATCCATCAATGCTAGTAGTCACCTATGAAGGCGATCATAATCACTCGCTCTCTGCCACCGATTCAACAAATCTCATACTGGAATCCTCTTAG 1011 0.5005 MAVELVMGYRNDSFVAKMDDNVVQEAASGLESVEKLIRLLSQSQQQFQSSSSSASKSPVEIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLVPPPPPPSVNQNPERQPPEPKVYYATPLQQIPPALLQHQTLGEQHPLIPKSGVIERKDSFKTINFSYSSAATSFMSSLTGDTDSKQPSSSSPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGRCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00099 336 Gene3D WRKY domain 250 324 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4752g00099 336 FunFam WRKY transcription factor 65 247 324 - -
Pral4752g00099 336 Pfam WRKY DNA -binding domain 265 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4752g00099 336 SMART WRKY_cls 263 323 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4752g00099 336 MobiDBLite consensus disorder prediction 96 112 - -
Pral4752g00099 336 ProSiteProfiles WRKY domain profile. 258 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral4752g00099 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 328 IPR044810 GO:0003700
Pral4752g00099 336 MobiDBLite consensus disorder prediction 199 234 - -
Pral4752g00099 336 MobiDBLite consensus disorder prediction 91 119 - -
Pral4752g00099 336 SUPERFAMILY WRKY DNA-binding domain 260 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral4752g00099 336 Pfam Plant zinc cluster domain 216 261 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00099 Pral-Chr4752 476150 478574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00099 17 324 WRKY Transcription Factor Family AT2G24570 47.352 2.48e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral4752g00099 WRKY 7.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00099 - - qsa:O6P43_033850 450.669