Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00094 ATGCCTCCTTCCCACACACCCTTCCTTGTCCTCTTCTTCCTGCCCCTTCTGTCCTCCTCTTCCCGCGCCGCCTCCCCCACCATCGACTTGCTCCTCCCTTCCGACGCCGTTTACCTCCTCTCCTTCAAATCCAAGGCTGACCGAGACAACAAGCTCCTTTACGCCCTCAACGAGCGCTATGACTACTGTCAATGGCAGGGCGTCAAATGCGCCCATGGCAGAGTCGTTCGCTTCGTCCTTCAGAACTTCGGTCTCCGTGGCGTCTTCCCCCCCGACACCTTGTCTCGTCTCGACCAGCTTCGAGTTCTCAGTCTTCGCAACAACTCCCTCTCTGGTCCCATCCCCGACCTCTCCTTTCTTGTCAACCTCAAATCCCTCTTTCTCGACCATAATTCCTTCTCTGGTTCTTTCCCGCCTTCCATTCTCTTCCTCCATCGCCTTCTCACTCTTTCTCTCTCCCACAACAACCTCACCGGCTCTGTTCCCGCCGGGTTAACTCTCCTGGACCGCTTGATTTCTCTTCGCCTCGATTTCAACGGGTTTAACGGAACCCTTCCCCCCTTGAACCAGTCCTCGCTTCGAATCCTCAATGTGTCCGGAAACAATTTGACTGGGCCGGTTCCGATGACGCCTACACTCAGTCGTTTACCGCCGGCGTCGTTCTCCGGGAACCAGGGTCTCTGTGGGGAGATCATCCACATAGCATGTAATTCTCGGCCTCCCTTCTTCAGTCCCTCCAATGCCTCCACCTCCGCGGCGCCACTTGGGCAAAGCGCGGAATCGCAGGGAATCATGGTCGTTCCTTCAAATTCATCTACTAAAAAGAAGCATAAGGACACTGCCTTGATTCTAGGATTTACCATTGGGTTCTCGGTGCTCATTGCATCCATCCTGTTCGCGATTGCATTGCTTAGGAAACGAAGCAATTCCAGAAGACCAGAGACCATGAAAGTACAGGAGTCCTTGGAAACCAAAGATGTAAATGCGCCTCCTCCTCCATCTTTAGCTGTCGAAACAGAGACAGAGCAAAATAGGGAATGGAGTGAGAAGGCAAAAAAGATAGAGAAAATAAAAGAAGCACATAAGAGTGGGAATTTGGTGTTCTGCAGTGAGGAGCCACAGTTGTGTACAATAGAGCAGCTGATGAGAGCTTCGGCGGAGTTGCTGGGTAGGGGAAACATAGGAACCACATACAAGGCTGTGTTGGATGGCCATCTCATAATGACAGTGAAGAGGCTGGATGCTATTAAAACAGCAATAACTAGCAGCCAAGAATTCGAGCATCACATGGAAATGGTGGGCGAGCTCCGGCACCCAAATTTGGTGCCGGTTAGAGCTTATTTCCAGGCAAAGGGCGAGAGGCTGGTGATCTATGATTATCAACCTAATGGCAGCCTCTTTAACCTGATACATGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACGTCATGCTTAAAGATTGCCGAAGATGTAGCCCATGGACTCGCCTATATACATCAAGCCTCGAGATTAATCCACGGCAACCTGAAGTCGACTAATGTCCTTCTTGGCGTGGACTTTGAAGCTTGTGTCACAGACTACGGCTTGGCCCTCCTTGCGGAGTTTTCATCAACTGAAGACCCTGACTCGGCAGCTTATAAAGCACCAGAGACTCGCAACTCTAGCCGCCGAGCCACTCCCAAGTCTGATGTATATGCCTTTGGGGTGCTTCTGTTGGAGCTTCTTACGGGTAAACATCCTTCTCAACATCCTTTCCTTGTGCCCGCGGATATGCAACATTGGGTTAGAGCAATGAGGGATGATGACGGTGCTGAACATAATGGGCTTGGAATGCTCACGGAAGTCGCTAGTATTTGCAGTGCAACGTCGCCTGAGCAGAGGCCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAGATAAAGGACAGTGTAACGATGGAAGATACAACTGCTAGGATTTAA 1968 0.5107 MPPSHTPFLVLFFLPLLSSSSRAASPTIDLLLPSDAVYLLSFKSKADRDNKLLYALNERYDYCQWQGVKCAHGRVVRFVLQNFGLRGVFPPDTLSRLDQLRVLSLRNNSLSGPIPDLSFLVNLKSLFLDHNSFSGSFPPSILFLHRLLTLSLSHNNLTGSVPAGLTLLDRLISLRLDFNGFNGTLPPLNQSSLRILNVSGNNLTGPVPMTPTLSRLPPASFSGNQGLCGEIIHIACNSRPPFFSPSNASTSAAPLGQSAESQGIMVVPSNSSTKKKHKDTALILGFTIGFSVLIASILFAIALLRKRSNSRRPETMKVQESLETKDVNAPPPPSLAVETETEQNREWSEKAKKIEKIKEAHKSGNLVFCSEEPQLCTIEQLMRASAELLGRGNIGTTYKAVLDGHLIMTVKRLDAIKTAITSSQEFEHHMEMVGELRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGLAYIHQASRLIHGNLKSTNVLLGVDFEACVTDYGLALLAEFSSTEDPDSAAYKAPETRNSSRRATPKSDVYAFGVLLLELLTGKHPSQHPFLVPADMQHWVRAMRDDDGAEHNGLGMLTEVASICSATSPEQRPAMWQVLKMIQEIKDSVTMEDTTARI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00094 655 Gene3D Transferase(Phosphotransferase) domain 1 462 654 - -
Pral4752g00094 655 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Pral4752g00094 655 ProSiteProfiles Protein kinase domain profile. 383 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00094 655 Pfam Leucine Rich Repeat 192 223 IPR001611 GO:0005515
Pral4752g00094 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 645 IPR046959 -
Pral4752g00094 655 Gene3D Phosphorylase Kinase; domain 1 343 460 - -
Pral4752g00094 655 MobiDBLite consensus disorder prediction 325 346 - -
Pral4752g00094 655 SUPERFAMILY L domain-like 33 229 - -
Pral4752g00094 655 ProSiteProfiles Leucine-rich repeat profile. 99 121 IPR001611 GO:0005515
Pral4752g00094 655 Pfam Protein kinase domain 386 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00094 655 Gene3D Ribonuclease Inhibitor 190 239 IPR032675 -
Pral4752g00094 655 Coils Coil 337 357 - -
Pral4752g00094 655 FunFam Probable inactive receptor kinase At5g67200 34 144 - -
Pral4752g00094 655 SUPERFAMILY Protein kinase-like (PK-like) 387 644 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00094 Pral-Chr4752 462171 465345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00094 17 655 Receptor kinase-like Gene Family AT3G50230 54.449 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4752g00094 Pkinase 3.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00094 - - qsa:O6P43_034522 859.751