Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00082 ATGACAAGGCCAGTGGAGGAGTCCCGCGACCGCGAGGGTGTCTCCAAAAGGCATCACTCTTTTCCCTCTTCGTCTCTCATCTCACTCTCTCTATATTCCTCGTTCCTCATGACGATTCACGCACTCTCTCTCCCTTTTGATCAAACTCGTCGAGAGAGAGGGATGGATGGTGAATCAGCGGAAGGTGGTGGAGTGAGGGGCAGAGAGACGCCAACCAGGAAAAGGGGGACCGTCGAACTTGCAGGCGAGAGAAGGTACAAAGGGATTAGGATGAGGAAGTGGGGCAAGTGGGTCGCCGAGATTCGAGAGCCCAATAAACGCTCTAGGATTTGGCTCGGTTCCTACTCCACTCCCGTCGCGGCGGCGCGGGCTTACGACACCGCCGTTTTCTATCTCAGGGGACCATCGGCCCGGCTTAATTTCCCGGACCTTCTGGAAGACGGCGGGGTTGGCGGATGCGACTGCGACATGTCGGCGGCTTCGATTCGGAAGAAGGCGACGGAGGTTGGTGCCAGAGTCGATGCGCTTCAGGCCGCTCTCCTCCATCACCACCATGCCTCGGTGGCGCCGGAGCTCATCTCACGCAGCGCAGTCTCCGGAGCGGGCTCCGGGGGGTTTTTGGAGGGGGTTGATCTTAACAAGATGCCAGAACCCGAGAATTCGGACTGCGACTACGAGTGA 681 0.5859 MTRPVEESRDREGVSKRHHSFPSSSLISLSLYSSFLMTIHALSLPFDQTRRERGMDGESAEGGGVRGRETPTRKRGTVELAGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLEDGGVGGCDCDMSAASIRKKATEVGARVDALQAALLHHHHASVAPELISRSAVSGAGSGGFLEGVDLNKMPEPENSDCDYE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00082 226 MobiDBLite consensus disorder prediction 50 74 - -
Pral4752g00082 226 MobiDBLite consensus disorder prediction 1 20 - -
Pral4752g00082 226 ProSiteProfiles AP2/ERF domain profile. 85 142 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 SMART rav1_2 85 148 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 Gene3D AP2/ERF domain 84 143 IPR036955 GO:0003700|GO:0006355
Pral4752g00082 226 SUPERFAMILY DNA-binding domain 85 143 IPR016177 GO:0003677
Pral4752g00082 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 80 222 - -
Pral4752g00082 226 CDD AP2 85 144 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 MobiDBLite consensus disorder prediction 1 18 - -
Pral4752g00082 226 Pfam AP2 domain 85 134 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 PRINTS Ethylene responsive element binding protein signature 124 144 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700|GO:0006355
Pral4752g00082 226 FunFam Ethylene-responsive transcription factor 2 84 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00082 Pral-Chr4752 425568 426859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00082 61 226 AP2-EREBP Transcription Factor Family AT5G67190 57.143 2.55e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4752g00082 AP2 1.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00082 K09286 - qsa:O6P43_024615 223.016