Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00079 ATGTGGGATCTGAATGACTCGCCCGATTGGAGAAAGGACGAGGAATCCGAAGGTGGTTCTTCCTTGAAGACATCCATGGACGGAGACGAGTGCAAAGGGAAAAGGGTCGGATCTGTGTCGAATTCTAGCTCATCTGCTGTGGTAATCGAGGACGGATCGGAAGAAGACGACGGTGAGAGGAGCAAAACATTGAAGAAGAAAAGCAGTAAGATATTTGGGTTCTGCGTGAACCAGGACGAGTCCATGGATAGTGACCCACCCGTGACCCGGCAGTTTTTCCCGGTGGAGGAGGAGGCGGCGGCCGTCTCATCAGGCGGAGGGAGCGCGGCCTTCCCTCGGGCCCACTGGGTGGGCGTAAGATTCTGTCAGCCAGAAGCAGTCGGCGGTGCTGGTGGTGGCGGAGGAAAATCCGCGGAAGTGGCGTCGCAGCCGATGAAAAAAAGTCGGCGAGGACCAAGGTCGAGGAGCTCTCAGTATAGGGGAGTCACCTTTTACAGAAGAACAGGTCGATGGGAGTCGCATATATGGGATTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCTATTAAGTTCCGGGGAGTAGAGGCGGACATCAACTTCAACATTGAAGACTACGAAGAAGACTTGAAGCAGATGAGCAATCTAACAAAGGAAGAGTTTGTGCACGTACTTCGTCGGCAAAGCACTGGGTTCCCCAGGGGAAGCTCCAAATATAGAGGCGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTTGGTTTGTTTGACACGGAGATTGAAGCTGCGAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACTAATTTTGATCCCAGCATCTACGACAATGAGCTTAATTCTGAATCCTCTGGCAACGCTGCGGATCACAATCTGGATTTAAGTTTGGGCAATTCGAGCTCAAAGCAAGCCCATAGTCAAGCAGTGGGCAACGATGCCCCGAACGCTGGAACTGATCATCACCACATGGCATCCGAATCTAGTTGGAGAAACAATGGAGGATTAATGAGGCCTAAGTTGACACTGCCGGATGGTCAAACTCAGCTTCATTCTGCAGCACCTAGAGAAATGCAAAGATTTGGCGCCTACAGGACATCGAGAGAGCCTCAAATGCTCCACAGTTTTGTTCCATCGCATCTTCAGCCACCAAGCTTTCATTTTCCAAGCAGCAGCAACGAAGGGCGGATAGGGAGTGATCTTTCACTGTCGATGAGCGAGAATCATCACCAGCAATCGGGGCCGCCGCCTCCTCTTCATCAAGCTCATTATATGGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAATAGACTTTCCCAAGGATGGCTGCAGAAAAATGGGTTCCACACACTCATGAGACCCAAATGA 1482 0.5061 MWDLNDSPDWRKDEESEGGSSLKTSMDGDECKGKRVGSVSNSSSSAVVIEDGSEEDDGERSKTLKKKSSKIFGFCVNQDESMDSDPPVTRQFFPVEEEAAAVSSGGGSAAFPRAHWVGVRFCQPEAVGGAGGGGGKSAEVASQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGNAADHNLDLSLGNSSSKQAHSQAVGNDAPNAGTDHHHMASESSWRNNGGLMRPKLTLPDGQTQLHSAAPREMQRFGAYRTSREPQMLHSFVPSHLQPPSFHFPSSSNEGRIGSDLSLSMSENHHQQSGPPPPLHQAHYMATAAASSGFPTQINRLSQGWLQKNGFHTLMRPK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00079 493 ProSiteProfiles AP2/ERF domain profile. 158 214 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 MobiDBLite consensus disorder prediction 419 450 - -
Pral4752g00079 493 MobiDBLite consensus disorder prediction 128 158 - -
Pral4752g00079 493 SMART rav1_2 158 220 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 SMART rav1_2 250 313 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 MobiDBLite consensus disorder prediction 1 20 - -
Pral4752g00079 493 PRINTS Ethylene responsive element binding protein signature 289 309 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 CDD AP2 158 215 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 Gene3D AP2/ERF domain 249 308 IPR036955 GO:0003700|GO:0006355
Pral4752g00079 493 Gene3D AP2/ERF domain 157 216 IPR036955 GO:0003700|GO:0006355
Pral4752g00079 493 MobiDBLite consensus disorder prediction 1 64 - -
Pral4752g00079 493 MobiDBLite consensus disorder prediction 317 349 - -
Pral4752g00079 493 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 81 403 - -
Pral4752g00079 493 SUPERFAMILY DNA-binding domain 157 215 IPR016177 GO:0003677
Pral4752g00079 493 FunFam AP2-like ethylene-responsive transcription factor 249 309 - -
Pral4752g00079 493 FunFam AP2-like ethylene-responsive transcription factor 157 216 - -
Pral4752g00079 493 Pfam AP2 domain 249 298 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 Pfam AP2 domain 158 206 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 ProSiteProfiles AP2/ERF domain profile. 250 307 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 SUPERFAMILY DNA-binding domain 249 309 IPR016177 GO:0003677
Pral4752g00079 493 MobiDBLite consensus disorder prediction 419 454 - -
Pral4752g00079 493 CDD AP2 249 309 IPR001471 GO:0003700|GO:0006355
Pral4752g00079 493 MobiDBLite consensus disorder prediction 317 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00079 Pral-Chr4752 410462 413945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00079 1 492 AP2-EREBP Transcription Factor Family AT4G36920 55.490 1.26e-140 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pral4752g00079 AP2 3.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00079 K09284 - gmx:100792442 643.654