Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00055 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAGACCCACCTCAATCTTCGGACTCCGCTTGTGGGTTGTGCTCGGGGTATGTGTAGGAGCCGCCATCGTGCTGCTTCTCTTCCTCCTTTCAATCTGGCTCGTTTCAAAGCGCTCCAAGACTAACCCCACTCAAAGGCCATCCATCCCGCTCGTCTCCAAAGAGATCCACGAGATTAGAATCGACCATCACCACGATTCCAAGCTCAGAGGGACCCGTATCCCAGTCGACCCGTCTCCCGAACTCGATCCAATTCCCGGAATTGAGCGCCAGGCTCTGCTCCCAGCATCGGAAGAAGAAAGCCCATCGGGGATCAATAGAATTCAATTTGAGATTGGGAAGAATCACAGAATTGCGTACCCTGAGCGTGCTCTGGCTCGGTCGTCTTCACACGGAAGCGGGGAGGCACGGCCCGTCGACCAGGGGCCTACGGTGATTCCTGAAGTCTCGCATTTGGGTTGGGGCCACTGGTATACTCTGAGAGAGCTTCAGGACGCGACGAATGAGTTCGCCGACGAGAACGTCATCGGGGAAGGCGGCTACGGAATTGTTTACCATGGTATTCTGAAGGACAATACTCATGTCGCTGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTTAAGGTCGAAGTGGAAGCTATAGGACGAGTCCGACACAAGAATTTAGTAAGGTTGCTAGGATATTGCGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTAGAGCAGTGGCTGCACGGGGATGTTGGGCCTTGCAGTCCTCTCACTTGGGAAATTCGAATGAACATTATTTTGGGAACAGCGAAAGGGTTAGCTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAACAACATTCTGATCGACAAGCAATGGAATTCAAAGGTGTCAGACTTTGGGCTTGCCAAACTCCTCGGCTCTGAGAGCAGCTACATTACAACACGTGTCATGGGCACTTTTGGATACGTAGCTCCCGAATATGCAAGTACTGGAATGTTAAATGAACGAAGTGATGTGTACAGTTTCGGAATTCTTATAATGGAAATAATTACAGGCAGGAATCCAGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTAACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCAAGGGCACTCAAGCGAGCCCTTCTTGTTGCTTTGCGTTGCACTGACCCTAATGCACAAAAGCGACCTAAAATGGGGCATGTCATACATATGCTTGAAGCTGAGGATTCTCCTCACAAAGAGGATCGGAGGGCAAAAAGGGATGCGGGAAATTCAGCTAATGATGAGGATAGGTTAAAAGAGGAGGCAACTGTGACAAGTGATGATGGTAAAGTTTGA 1485 0.4889 MLDPSSPAMNDQLSRPTSIFGLRLWVVLGVCVGAAIVLLLFLLSIWLVSKRSKTNPTQRPSIPLVSKEIHEIRIDHHHDSKLRGTRIPVDPSPELDPIPGIERQALLPASEEESPSGINRIQFEIGKNHRIAYPERALARSSSHGSGEARPVDQGPTVIPEVSHLGWGHWYTLRELQDATNEFADENVIGEGGYGIVYHGILKDNTHVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSNNILIDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEDRRAKRDAGNSANDEDRLKEEATVTSDDGKV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00055 494 MobiDBLite consensus disorder prediction 441 494 - -
Pral4752g00055 494 Gene3D Transferase(Phosphotransferase) domain 1 259 481 - -
Pral4752g00055 494 MobiDBLite consensus disorder prediction 448 494 - -
Pral4752g00055 494 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Pral4752g00055 494 PANTHER OS01G0323000 PROTEIN 8 478 - -
Pral4752g00055 494 Pfam Protein kinase domain 184 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00055 494 CDD STKc_IRAK 189 455 - -
Pral4752g00055 494 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00055 494 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Pral4752g00055 494 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00055 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Pral4752g00055 494 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Pral4752g00055 494 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Pral4752g00055 494 Gene3D Phosphorylase Kinase; domain 1 163 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00055 Pral-Chr4752 304145 307713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00055 160 485 Trihelix Transcription Factor Family AT1G70460 43.620 2.64e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pral4752g00055 Pkinase 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00055 - - qsa:O6P43_024625 804.283