Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00032 ATGGTGGTGGGTCATGGAAGTAGCCGAGCGTTAGAGGATCGGTCCGTTAAGAAGGAGGTAGCCGACCACCCTCGTGCTTCTACGGCTGCCGGAAAAGCCGTTACTCCTCCGAGGCACGGTAAAAATACGGATGACGATGATGACTTGACCCTGGCCAATTGGTCAAAGTCTCCCAAACGAGTCCCTCCTTCAACCACGCACAAACGGAACAAGATGGTGCAGAATCAACACAGGCTTCAGAAAAAACATTTGGTTTCTATACCTAATCAAGGCTTATCCGATCAGGCACAAAAGCTTGCAAGCTCCACTAAGGTGGCAACAGACAGGACATTATCAGCAGGAGAGGCCAGGTCGTCTGCTGTGTTTCGAGCGGAGATGATCCAATCAAACTTAGATCCGAGGGTCCCTAGCTTTGTGAAGTCATTGGTCAGATCACATGTTGCTGGTTGTTTTTGGATGGGGCTCCCTGCGTTTTTCTGTAAAAAACACTTACCGGATAGTGACACTACCATTACTTTGGAAGATGAATCTGATAAAGAATACCAGTTGAAATACATTGCTTGCAAGACAGGTTTAGGCTCTGGTTGGAGGCAGTTTTCTGCAGTCCACAAATTGCAGGAGGGAGATGTTTTGGTTTTCCAGTTAGTTGAGCCTTCTAAATTTAAGGTATATATAGTGAGAGCAAATGGCTTAGGCGAACTGGATGGGGCGGTTTCCCTTCCGAATCTCGATGATTATACCAAGCAAAAAGCAAAAGACAATGCAAACAAGGATGCTCAACTGAGTAATAGCCCTAAGAGGAAACAAGAAAAATCTGACTCGCCACCTCCAGTTGTCCAAAAGAAAAACAAGACAAGTGTGTCGAGAATTTCCCCCAAGGTTCGGCAGTGTGCTGAACAATGTGAATATGAAAGTGATGAAGCTGGTTCAGAAGGACTGGAGAGCCTTGGAACGGAACTTAAATTCAAGGATGTAAAAAGCTTTGAAAATTTCAGTATCATAATTGATGGGATTCCCATCGATTCTGAGCTCCCCCAGGAGTTTCGAAATAAGTATTACAAACTCTGCCATAGCCAGCAGGCCTTTCTGCACGAGAATCTCATAAAGGGCATCAATTATAACCTCATTGTCGGCATTATATCTGAAGTTGTCAACATTGCTGATGCCTTGAGATCTAGTTCACTGCATATTCCACCCGCTGAATTTGCTAAATGGGACAAAGAGTTGCTAGCCTTTGAGTATCTGGGGATGAATGTGGAATTTTTAAGACACCGGTTATGCAGGCTTGTCAACTTGGCATATGAAGCACAAGATACCTCCGAGGCTTCAAGGTATTCGGCGTCCGCAACTGAATTCAGTCGAGCAGATAACGAAATAATGAATATTGAAACAAAGCTTGAAGAATTGAAAGAAGCTTGTGATGGTTTTGGTGCTTATATTGAGAGTTTGAAGTACAAAGACGAACGCTTCCATCACAAGTTTCACCAATGA 1491 0.442 MVVGHGSSRALEDRSVKKEVADHPRASTAAGKAVTPPRHGKNTDDDDDLTLANWSKSPKRVPPSTTHKRNKMVQNQHRLQKKHLVSIPNQGLSDQAQKLASSTKVATDRTLSAGEARSSAVFRAEMIQSNLDPRVPSFVKSLVRSHVAGCFWMGLPAFFCKKHLPDSDTTITLEDESDKEYQLKYIACKTGLGSGWRQFSAVHKLQEGDVLVFQLVEPSKFKVYIVRANGLGELDGAVSLPNLDDYTKQKAKDNANKDAQLSNSPKRKQEKSDSPPPVVQKKNKTSVSRISPKVRQCAEQCEYESDEAGSEGLESLGTELKFKDVKSFENFSIIIDGIPIDSELPQEFRNKYYKLCHSQQAFLHENLIKGINYNLIVGIISEVVNIADALRSSSLHIPPAEFAKWDKELLAFEYLGMNVEFLRHRLCRLVNLAYEAQDTSEASRYSASATEFSRADNEIMNIETKLEELKEACDGFGAYIESLKYKDERFHHKFHQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00032 496 MobiDBLite consensus disorder prediction 250 291 - -
Pral4752g00032 496 Pfam B3 DNA binding domain 138 228 IPR003340 GO:0003677
Pral4752g00032 496 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 70 229 IPR044837 -
Pral4752g00032 496 CDD B3_DNA 136 227 IPR003340 GO:0003677
Pral4752g00032 496 SMART B3_2 138 229 IPR003340 GO:0003677
Pral4752g00032 496 Gene3D - 115 230 IPR015300 -
Pral4752g00032 496 SUPERFAMILY DNA-binding pseudobarrel domain 131 230 IPR015300 -
Pral4752g00032 496 Coils Coil 452 472 - -
Pral4752g00032 496 MobiDBLite consensus disorder prediction 38 53 - -
Pral4752g00032 496 ProSiteProfiles B3 DNA-binding domain profile. 138 229 IPR003340 GO:0003677
Pral4752g00032 496 MobiDBLite consensus disorder prediction 1 72 - -
Pral4752g00032 496 MobiDBLite consensus disorder prediction 263 277 - -
Pral4752g00032 496 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00032 Pral-Chr4752 188217 192295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00032 108 269 B3 DNA Binding Superfamily AT3G19184 40.805 7.90e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral4752g00032 B3 3.8e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00032 - - vra:106768002 490.345