Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00019 ATGCGTTGGTTATCTTCCCTTTCCTTGTCCCATTCTCATGGTCTCAAATCCTCCTCTACCTCTTCTTCTTTTTCCACCTCCGACGTTGACCACCCTAAGAAGAAGTCTGCAGATGCCAGTCGGGGTTTGGGTGGCGTTTGGCCTTTCGGTATCGGCAAAAAGGCTAGCCGCCCCAAGACGCTCCGGCCTATAGGTGATAGTGATGGCAGGTCCCCTCCCAGGTGGCATGATTCCGATGATGACGTTCTTGTGCCCTTGGCTCATTCCACGACCCCCTCTGATCGTCAATTTAGTCGTTCCAATACAACGTCCTTTTCTTCCTCCTCCGTCGCACCTCAACCCTTGCCCTTGCCGGACGCGGCGCTCTCTCGCCACATAGACGCTGATTGCCCTTTACCTTTCCCGAAAGATGTGGCCGGACCCAACAGCGCTGCGAAAGGGCTACCAGATCGCGATCGAGCTGATGGCGTGATGGGCGGGGTCTCCTCTGTTTTTCGAATTCAGAGTGTGTTTGCTAGCCCGGGCGTAAAAAAGAATAAGGCGCAAGCGGAAATGGGGTCATCTGTGATGATGCGTCAGGATCTAAGTGGTAGCGAAAGTAATCAAGTTAACTTCCGCATTGAAGTCCCAACTTGGAGTGCTCCAGTTAGTCCTTTGAACAGTCCCTTGGTGAGCCCGAACAATGGAAGACATAGTGATTTCGTTCAATATTGTTACGTGTGTCCCCCGCCAAGTCAATATTGGTCGGCACCAGAGATGGTCACGTCTGATGCATCATCAGGGACGACGCATCCTGCATTATTTGATTTAACTGCATTATCTACTGATACTTCTCCTCATCACAGTCCACGAGGTAGAAGTCCTAACCAAAATCTCAGGAGCCGAAGTGGAGCTTCCTCGCCAATACGTCCCAGGTTATCTCTCGAGACCTCAGTAGCACGTCGCGACTTCAATGCCCCCTCTCTCAACGTTCACCCCTTACCATTGCCTCCTGGGGCACCCTTGCTTTCCCCATCCCCTAAATTCTCCCCCACTGTGCCTAAGTTAGAGTCCTCCTCGATGAAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGTGGTACGTTTGGAAGTGTTTATGTGGCTACCAACAGAGAAACTGGAGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCCGATGACCCCAAATCCGCCGAGTGTATTAAACAGTTAGAGCAGGAAATCAAAGTTCTTAGCCAGCTGAAGCATACAAACATTGTGCAGTATTATGGCAGTGAAATCGTTGAAGACCGGTTTTATATTTATCTGGAATATGTCCATCCTGGATCAATAAACAAATATGTCCGTGAACATTGTGGCGCCATAACAGAATCTGTTGTTCGAAGTTTCACTCGTCATATTCTTTCAGGCTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATTAAAGGGGCTAACTTGCTTGTTGATTCTACTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTCACTGGACATGCAGCTGATCTTTCTTTAAAGGGAAGTCCATACTGGATGGCTCCTGAGCTTATGCAAGCAGTGATGCAAAAAGACAACAGCTCAGATCTAGCTTTAGCTGTCGACGTTTGGAGTTTGGGTTGCACAATCATAGAAATGCTCACAGGGAAGCCTCCTTGGAGTGAATACGAAGGAGCTGCGGCTATGTTTAAGGTTATGAGGGATACCCCTCCTATACCTGAAACATTGTCATCGGAAGGTAAAGACTTCCTGAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGTCAACTGCTTTAGCTTTACTTGAACATCGGTTCTTGAAAAATGCACAACAGCCTGATGTTTCATATTCTGTGCAGTCTCATAATGGAATAAATTTGACGGACAGACCCCTTAGTCCCAGAGGGCAATCTGAACATTTATCTGATCAGTTGCTAACTACTAGTATGCAAATTGCAAAAGGGAAGGGCAATGAAAGATGGACAGAAACCGCAGTGTAA 2037 0.4772 MRWLSSLSLSHSHGLKSSSTSSSFSTSDVDHPKKKSADASRGLGGVWPFGIGKKASRPKTLRPIGDSDGRSPPRWHDSDDDVLVPLAHSTTPSDRQFSRSNTTSFSSSSVAPQPLPLPDAALSRHIDADCPLPFPKDVAGPNSAAKGLPDRDRADGVMGGVSSVFRIQSVFASPGVKKNKAQAEMGSSVMMRQDLSGSESNQVNFRIEVPTWSAPVSPLNSPLVSPNNGRHSDFVQYCYVCPPPSQYWSAPEMVTSDASSGTTHPALFDLTALSTDTSPHHSPRGRSPNQNLRSRSGASSPIRPRLSLETSVARRDFNAPSLNVHPLPLPPGAPLLSPSPKFSPTVPKLESSSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLKHTNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITESVVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSTGVVKLADFGMAKHLTGHAADLSLKGSPYWMAPELMQAVMQKDNSSDLALAVDVWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMRDTPPIPETLSSEGKDFLRCCFKRNPAERSTALALLEHRFLKNAQQPDVSYSVQSHNGINLTDRPLSPRGQSEHLSDQLLTTSMQIAKGKGNERWTETAV 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00019 678 MobiDBLite consensus disorder prediction 59 83 - -
Pral4752g00019 678 SUPERFAMILY Protein kinase-like (PK-like) 345 648 IPR011009 -
Pral4752g00019 678 MobiDBLite consensus disorder prediction 89 113 - -
Pral4752g00019 678 MobiDBLite consensus disorder prediction 1 119 - -
Pral4752g00019 678 MobiDBLite consensus disorder prediction 273 306 - -
Pral4752g00019 678 Pfam Protein kinase domain 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00019 678 Gene3D Transferase(Phosphotransferase) domain 1 354 646 - -
Pral4752g00019 678 ProSitePatterns Protein kinases ATP-binding region signature. 364 387 IPR017441 GO:0005524
Pral4752g00019 678 MobiDBLite consensus disorder prediction 633 652 - -
Pral4752g00019 678 ProSiteProfiles Protein kinase domain profile. 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4752g00019 678 MobiDBLite consensus disorder prediction 1 27 - -
Pral4752g00019 678 MobiDBLite consensus disorder prediction 273 307 - -
Pral4752g00019 678 FunFam Mitogen-activated protein kinase kinase kinase 5 355 656 - -
Pral4752g00019 678 MobiDBLite consensus disorder prediction 135 154 - -
Pral4752g00019 678 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 16 629 - -
Pral4752g00019 678 SMART serkin_6 358 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00019 Pral-Chr4752 93751 98871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00019 76 657 MAP Kinase Kinase Kinase AT5G66850 56.840 0.0 604
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pral4752g00019 Pkinase 1.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00019 - - qsa:O6P43_033798 788.489