Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00004 ATGGCAGGCGGTGTGACCGGAGAAGCTGCTTTGGGAGCTCTACTTGAGGAAGGGCTGAGAAGTGGGTTGGATTTGGTGGACAAGGCTATCAACTCCCCAACCAAACGTGAGGATCTCCGAGACACCGTTCAGCGTTTGACTCCGCTGATCCGGCAGATGAAGGTATATGACGAGACATGGGATCGCCCTCTGGATCAAATCGAACGAGTGTTGAGGGAATTTCAAGAGTCAGATATGCAAGTTTACACGGCGAGAGACGTGAAGGAGATTTTGTCGACCTTGTCGACCCTGAAAGAAATTATGTTGACTCTTGTTAATAACTCTCTTTCTGGGCTAACAAGTAGCGGCACGGTCATCAAGGGCCTGTGCGGAACTCCTGAGAAGCCAAAGTATATCGTGGGATTGGAAGGGGCCTTGAAGAGGTCCAAGAATGAGCTGCTTAACGGTGATGAACCTGTTCTTGTATTGACTGGTTTGCCAGGATCGGGCAAGACAACCATGGCTAAAGAACTTTGCTGGGACCCCGATGTTAAAGACAAGTTCGGGGAAAACATCTTCTTTGTGATCTTTTCAAAAACGCCCAACTTGAAGAATATTGTGCACACAATATTTGGACACTGTGGGCTCCCAGCGCCTGAGTTTTCGAGCGATGAAGACGCAATTAATCGACTTGGTTTTTTGCTAACGCAATTCGGGGGAAGGCCGATATTGTTGGTCCTGGATGATGTTTGGCAGGGCTCAGAAACTATTGTTGAGAAATTTAAATTCCAGATTTCTAATTATAAAGTTTTGGTCACTTCAAGAGTTGCATTCCCTAGATTTGCCACTTCATGCCACTTGGAACCACTTGGTCATGATGATGCGATAAGGCTTTTTCATCACTTCTCTCTATTAGATGACAACTGCTCATTCAAACCCGATGAGAAACTTGTCCGCGAGGTAGTAAGAGGTTGCAAGGGTTCACCATTGGCAATTGAAGTTATTGGCGGATTGCTCTGTAAGCAGCCCTTTGAGGTATGGCAACAGATGAAGGAGCTTTTGCTAAGCCAGTCTATATTTAATTCTAACACTGACTTGCTCCATCGCCTCCAAACGAGCTTAGAAGTAATGGGAGATAAGTTCCCCATCAAGAAGGAGTGCTTTATGGACCTAGGCTTATTTCCTGAAGACAAAATGATCCCTGTTGATGCCCTCATTGACATGTGGGTGGAACAGTATAACCTAGATGAGGGTGGCATAGAAGCAATGGCCACGATCCATGAATTAACCAACAGAAATCTGGCCAAGACTGTCATTAGAAGGAAAGTAGAAAGGGAAACAGACAAGTACTACAATAATCACTTTGTCATGCTGCATGATCTTCTCAGAGAACTAGCCATTCATCAAAGCAGCCTAGAACCCTTTGAAGAGAGGAAAAGGTTAATTATTGACTTGGGTGAAAACAATCATCCCAAATGGTGGCCAGAACAGAAGCAGCAAGGGGTCATTGCCCGCATCTCCTCATTATTATTCGGATGGAAGATGGAACAGAAGCAGCAGCAAGTTACTGCCCACTCATTATCTATATATGCAGATGACACGTCTACTGCAGAATGGTGCAACATAGAATCTGATGAAACCAAGGTTTTGATTTTAAATCTTCAAAGTAGCAATTACGCGATACCAAATTTCGTGAAGCAAATGAGAAAACTCAAGGTTCTGTTAGTCACGAATTATGGTTTCCATATTTCCAAATTAAACAAATTTGAGTTGCTTGGTTCTCTATCTGAACTGAAAAGAATTAGATTGGGGAAGATTGCAGTACCTTCCCTGTGCAAATTGATGAATCTGCAAAAATTATCGCTGCATATGTGTAGTACATTGCCAGCTTTTGAAAGTTGTCCCATGGACATTTCAGAGGCGCTGCCAAATCTAGTGGAGTTGAATATTGATTACTGTAAAGATCTGGTGAAATTGCCTGTTGATATTTGCAAAATTAACCCCTTGAAGAAGCTTAGTATCACTAATTGTCACAAGTTTTCTGAACTGCCAAAAGAAATAGGAAGCCTGGAGAATCTGGAAGTGCTGAGGCTCAGTTCCTGTTCTAATTTGGAAGAGATGCCAGCCTCCATCAAAAGGCTCCAGAAGCTAGGCCATCTTGACATCTCAGACTGCATAAGCCTTAAGCAACTACCAGAGGAGTTTGGGTACTTGGGCAATCTAGAAAAGCTCTACATGAGGGGTTGCTCAAGATGTGAATTGCCAGTCTCAGTCATGAATCTCCAGCGTTTAACGATTGTGATATGTGATGAAGACACGGCTGCATCCTGGGAACCATTCCGGCCTCATCTTCCCCATCTTACGATAGAGCAGCCTGAAGCAGATGTTAACTTAGATTGGCTTCAAGGAGATTAA 2394 0.4378 MAGGVTGEAALGALLEEGLRSGLDLVDKAINSPTKREDLRDTVQRLTPLIRQMKVYDETWDRPLDQIERVLREFQESDMQVYTARDVKEILSTLSTLKEIMLTLVNNSLSGLTSSGTVIKGLCGTPEKPKYIVGLEGALKRSKNELLNGDEPVLVLTGLPGSGKTTMAKELCWDPDVKDKFGENIFFVIFSKTPNLKNIVHTIFGHCGLPAPEFSSDEDAINRLGFLLTQFGGRPILLVLDDVWQGSETIVEKFKFQISNYKVLVTSRVAFPRFATSCHLEPLGHDDAIRLFHHFSLLDDNCSFKPDEKLVREVVRGCKGSPLAIEVIGGLLCKQPFEVWQQMKELLLSQSIFNSNTDLLHRLQTSLEVMGDKFPIKKECFMDLGLFPEDKMIPVDALIDMWVEQYNLDEGGIEAMATIHELTNRNLAKTVIRRKVERETDKYYNNHFVMLHDLLRELAIHQSSLEPFEERKRLIIDLGENNHPKWWPEQKQQGVIARISSLLFGWKMEQKQQQVTAHSLSIYADDTSTAEWCNIESDETKVLILNLQSSNYAIPNFVKQMRKLKVLLVTNYGFHISKLNKFELLGSLSELKRIRLGKIAVPSLCKLMNLQKLSLHMCSTLPAFESCPMDISEALPNLVELNIDYCKDLVKLPVDICKINPLKKLSITNCHKFSELPKEIGSLENLEVLRLSSCSNLEEMPASIKRLQKLGHLDISDCISLKQLPEEFGYLGNLEKLYMRGCSRCELPVSVMNLQRLTIVICDEDTAASWEPFRPHLPHLTIEQPEADVNLDWLQGD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00004 797 Gene3D Ribonuclease Inhibitor 496 775 IPR032675 -
Pral4752g00004 797 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 4 794 IPR039203 GO:0050832
Pral4752g00004 797 PRINTS Disease resistance protein signature 318 332 - -
Pral4752g00004 797 PRINTS Disease resistance protein signature 681 697 - -
Pral4752g00004 797 PRINTS Disease resistance protein signature 230 244 - -
Pral4752g00004 797 PRINTS Disease resistance protein signature 153 168 - -
Pral4752g00004 797 Gene3D - 366 462 IPR036388 -
Pral4752g00004 797 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 383 IPR027417 -
Pral4752g00004 797 Gene3D - 121 275 IPR027417 -
Pral4752g00004 797 Pfam NB-ARC domain 139 358 IPR002182 GO:0043531
Pral4752g00004 797 Gene3D - 283 365 IPR042197 -
Pral4752g00004 797 SUPERFAMILY L domain-like 542 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00004 Pral-Chr4752 19178 22922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00004 587 757 WRKY Transcription Factor Family AT4G12020 27.692 3.14e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00004 - - gmx:100792590 840.106