Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00003 ATGGCAGCGGGTGCAAACCTAATTGGCGGAGATGATGTGGCAGCGGTGTTTCGAGAGTTGTTGAAAAAGATAGAGGACTGGATCGAGAAGGCTCACCAGAGTAGATCCACACGCCAAATATTGAGGTCAACTCTGAAGGATTCCACGTCGCTGGTGGAAGAGATCAAAAAATTGAACGATCACTTGGATTCCCCAAGAGAAGAAATAGAAGAGCTGATCCAGGAAAAGGAAGCAGGAGATACGCTCGTTAGCAAGTCCCCGAGAATCTCTTTTTGGAATTTTCTCTTTCCAAAATCCTACCAGGACAAGCTCAGACAAAGGCACGGTTCAATCGTCAAGTGCCTGTCTTTTAATTCGAGAAGTGAAAATAAGATGGCAAGGGATGTGAAGGAAACTCTGAAGCAGGTGAGAGAAATTCTCGAAACGATGAGCAAAGAGAACTCCGACCACGGAATTATGTGCTTGCCTACTCAGAACCCTGAATTCGTCATCGGCATGGAGGAGCCCTTGGTGAGGTTGAAGATGGAGCTCCTCAAGGACGGTGCCTCCATTCTTGGGTTGACGGGTCTACCAGGATCCGGCAAGACCACGTTGGCCAGGAAGCTTTGTAGTGATGACCAAGTCAAAGGTAAGTTCAGGGACCATATCTTGTTTGTGACCTTCTCAAAAACACCCAACTTCAAGGTCATTGTGGAGGCTCTATTTCAACGCTGTGGGAAGGTTCCTGAGTTTCATAGTGACGAAGAAGCAGGTAAAGAATTGGGACTTCTGTTGAGTACAATATCGGGCAGTCCGATATTGCTGGTGCTGGATGACGTTTGGCCCGGCTCAGAATCACTTGTTCAGAACTTCAAGCTCCAGATTCCCGATTATAAGATTTTGATCACTTCGAGAGTCACATTTCCAACGGCTAAACCTCGTATCCACTTGGAACCACTTCCTTATGAAGATGCACTAACACTTTTCCGTCACTTTGCTCTCGTAAAAGACAATTGCTCGTACATTCCCGATGAATTTCTTGTCCAAGAGGCTGTGAGAAGTTGTAAGGGCCTACCTATCGCCATTAAAGTAATCGCTAGATCACTGTGTCAGCAGCCTCGTGAAACGTGGCAAAAGATGATAAAGGAATGGTCGCAAGGCCATTCTATTCTTGATTCCAATTCAAATTTGCTTAATTTCCTCCAAAGAAGCTTGTGTGTTTTGGAAGGTGAGCCCATCATCAAGGAGTGCTTCATGGACCTAGGGTTATTTCCCGAAGACCAAAGAATTCCTGCTACGGCTCTCATTGATATGTGGGCGGAACTGTATCAACTAGACGATAACGGCAAAGAAGCCATGGCCATAATCAATAAATTAGTATCCCTGAATTTGGCAAACCTCCATGTTACAAGGAAAGTCGAAAGTGATGCAGACAGTTACTACAACAACCACTTCATCATGCAGCATGACCTTCTAAGAGATCTTGCAATTCATCAAAGCAACCAAGAACCTGTTGAACGGAGAAGAAGATTGATGGTTGACATAAATGAAAATAATCGACAATGGTGTCTAGAGGAGCACCAGCGAGGCATTATTGCCCGCATGTTGTCGATATTCCTTAAATGGTTCGTTAAACAAAAGCAGCAACCTGCCATTGCACGGACATTGTCTATATCAACTGATGAAGCATTCACTTCAGATTGGGGCAATGCGCAGTTAACTGAAACTGAGGTTCTAATATTGAATGTTCGTACTAAGCATTATTCCTTCCAGAAGTGCATTGAGAAAATGAAAAATCTAAAGGTTCTGATATGCACTAATTATGGTTTTCATGCTTCCGCATTGGAAAACTTTGAGCTACTTGATTCTTTATCTGCCCTGAAAAGAATGAGACTGGAGAAGGTTTCTCTTCCTCCCCTCGGCAAACTGAAGTATCTGCAAAAATTATCCCTTTACATGTGTGATACAAGTCAAGCTTTTGGAAGCTGTAAGATACCAATTTCAGATGCATTGCCGAATCTAGTAGAATTGAACATTGACTATTCCAAAGATATGGTGGAATTGCCTTCTGGTCTCTGTGATATTAAAACCCTCAGAAAGCTTAGTATTTCCAACTGCCACAAGTTTTCTAATTTGCCCCGAGAAATAGGCAGGCTGCAGAATTTGGAACTACTGAGGCTTAATTCCTGTACTGATTTAGGAGGTATACCAGAATCAATTGGCTGGCTTTCAAGGTTACGTTTTCTTGACATATCAAACTGCATAAGCCTAAGAAATTTACCTGAGAGCATTGGTGAGTTACAAAACATAGAGAAGTTGTACATGACAGGTTGCTCAAGGTGTGAACTGCCAGACTCGGTCATGAATCTTGAGCATTTAAAAAGTGTAACATGTGATGAGGAGACGGCTGCTTCATGGGAGGTTTTCAAACCAATGCTTAACAAATTAAGGATTGAGGTGCCACATGTGGATGTCAACTTAAATTGGCTTATCGGGACTGGCTTATAA 2487 0.431 MAAGANLIGGDDVAAVFRELLKKIEDWIEKAHQSRSTRQILRSTLKDSTSLVEEIKKLNDHLDSPREEIEELIQEKEAGDTLVSKSPRISFWNFLFPKSYQDKLRQRHGSIVKCLSFNSRSENKMARDVKETLKQVREILETMSKENSDHGIMCLPTQNPEFVIGMEEPLVRLKMELLKDGASILGLTGLPGSGKTTLARKLCSDDQVKGKFRDHILFVTFSKTPNFKVIVEALFQRCGKVPEFHSDEEAGKELGLLLSTISGSPILLVLDDVWPGSESLVQNFKLQIPDYKILITSRVTFPTAKPRIHLEPLPYEDALTLFRHFALVKDNCSYIPDEFLVQEAVRSCKGLPIAIKVIARSLCQQPRETWQKMIKEWSQGHSILDSNSNLLNFLQRSLCVLEGEPIIKECFMDLGLFPEDQRIPATALIDMWAELYQLDDNGKEAMAIINKLVSLNLANLHVTRKVESDADSYYNNHFIMQHDLLRDLAIHQSNQEPVERRRRLMVDINENNRQWCLEEHQRGIIARMLSIFLKWFVKQKQQPAIARTLSISTDEAFTSDWGNAQLTETEVLILNVRTKHYSFQKCIEKMKNLKVLICTNYGFHASALENFELLDSLSALKRMRLEKVSLPPLGKLKYLQKLSLYMCDTSQAFGSCKIPISDALPNLVELNIDYSKDMVELPSGLCDIKTLRKLSISNCHKFSNLPREIGRLQNLELLRLNSCTDLGGIPESIGWLSRLRFLDISNCISLRNLPESIGELQNIEKLYMTGCSRCELPDSVMNLEHLKSVTCDEETAASWEVFKPMLNKLRIEVPHVDVNLNWLIGTGL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00003 828 Gene3D - 394 492 IPR036388 -
Pral4752g00003 828 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 823 IPR039203 GO:0050832
Pral4752g00003 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 414 IPR027417 -
Pral4752g00003 828 Coils Coil 55 75 - -
Pral4752g00003 828 Gene3D - 146 302 IPR027417 -
Pral4752g00003 828 PRINTS Disease resistance protein signature 348 362 - -
Pral4752g00003 828 PRINTS Disease resistance protein signature 260 274 - -
Pral4752g00003 828 PRINTS Disease resistance protein signature 184 199 - -
Pral4752g00003 828 PRINTS Disease resistance protein signature 734 750 - -
Pral4752g00003 828 Pfam NB-ARC domain 169 379 IPR002182 GO:0043531
Pral4752g00003 828 Coils Coil 126 146 - -
Pral4752g00003 828 Gene3D - 313 391 IPR042197 -
Pral4752g00003 828 SUPERFAMILY L domain-like 565 792 - -
Pral4752g00003 828 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 138 IPR008808 -
Pral4752g00003 828 Gene3D Ribonuclease Inhibitor 532 808 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00003 Pral-Chr4752 11037 16223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00003 164 781 WRKY Transcription Factor Family AT5G45050 23.438 3.27e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00003 - - pcin:129287270 1078.16