Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4752g00002 ATGGCAGAAACGGTCATAGAATTTCTACTCGACGAACTGCTGAGCAAGGTTTTGGAGGCGAAGGACAGGGCAATTCAGTTCAGACCCACCCTTGAACGCATGGCCACCACCCTCAGGTCAATAAAACCAGTGATCGAAGAGATAAAACAATACAACAGGCAACTAGATCGGTCAGAGGATGAAACAAAGAAGTTAATTGAAGATGTGAAGAATGGGGAAAAGCTTGTTCTCAAGTGCTCAAAAATCCAGTGGTGGGAATGCTGCTATAGGCCCCAATACCAGGAGCAACTTGAAGATTTGGATCAGTCACTTGTCAGGTTCTTTCAAGTTGATATGCCAGTTCAGACGGCGAGGGATGTGAAGGAGACGCTGGTAGAGGTGAGAGGCATTCATATGGAGATTAAGAAACTGAATGCGGTTGCGAGAAATGAAAGGGGCCTGTGCTCGGCTCCCGAGCCCCCAACATTCACAGTTGGATTGGATGTTCATGTTGGGGAATTGAAGGTGCGGCTACTCCAGGATGACGTGTCAGCGATCGTGGTCACCGGCTCGCCGGGTTCTGGGAAGACCACATTGGCCAAAAAGTTCTGTTGGGATGCTAATGTCAGAGGTAAATTCAAGGACAATATCTTCTTTGTCAAATTCTCGGAGACGCCAAATTTGAACGCTATCGTACAGAAACTTTATCAACACAATGGTCGCTCAGTGTCCGAGCCTCAAAATGATGAAGAAGCGATTGACCTATTGAAACTTTTGCTAAAGCAAATTGGGGAAAATCCTACACTGTTGGTTCTGGACGATGTTTGGGATAGATCGGAATCTCTTGTTGATAATTTTCGCATGCAGCTGCCGGAATATAAGATTTTAGTGACTTCCAGATTCGCAATTCGAAGATTCGGCACCCCCTATTGCTTGAGACCCCTTGGTAATGAGGATGCTGTGAAGCTTTTCCGCGACTCCGCAGAACTGAGGGAGAGCCGTTTTGATGTTCCTGATCATATTGTGAGAGAGATAGTCCAAGGCTGCAGTGGTTCTCCAATGGTGCTAAATGCGATTGGCAGGTCACTCTGTGGGCAGGATGCTGTGGTATGGCAAAGCAGGGCAACAGAATTGTCGAAGGGTCGCCCGATTTTTGAATCTAATGAAAATCTGCTCGCTTTTCTCCAAAAAAGCTTCGATGTCTTGGACACTAAGTCAGTAATTAAGGAGCGTTTCATGGACCTAGCTTTATTTCCTGAAGGCCAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAATTGTATGGAGAAGATGACGTAAATGCAATGGAGAAAATTTATGAACTGGCCACCCGTAACATGGTTGAAATTGTCGTAAGGAAATTTCCAAGTGGCACAGGTAACTTCAGTAGCCACTTTGTCAATCGGCATGATCTTTTTCAGGAGCTAGCTATCCATCAAAGGCAAATTAGCCAGGAGCCACTGGAAAAGAGGAAAACACTGATTATTGACATAACTGCAAACGAACTTCCCCAGTGGTGGACTGACCAAAAAGAGTATCATATAGCTGCCCGCGTATTATCTATATCAACTGATGAATTATTCTCTTCTGATTGGTGTAACTTGATACCAACTGAAGTTGAGGTTCTAGTTTTGAACTTTCGAGGGAAGAAGTACACCATACCAAGGTTCATAGAGAAAATGAATAAACTAAAAGTTCTGTTAATCACAAATTATGGTTTCCACCCTGCTGCTGAGTTAGAGAATTTAGAACTGCTTAATTTGTTGCCCAATGTTAAAAGAATTAGACTGGAGCGTGTATTGATCCCCTCCCTCGTTGAGAAAAGAGTGCACTTGAAGAATCTTCAGAAACTGTCTCTGTTTATGTGCAATGTGAATGAAGCTTTCGAAAATTGTTCCGTCCCTGTTTCAGATATGATGCCAAACTTGGTGGAACTGAACATTGACTACTGTAATATGGTGGAATTGCCAGTTGGGTTGTGTGGTTTTGTCTTCTTAAAGAAGCTTAGTATTACCAGTTGCCACAAGCTTTCCGCACTTCCTGAAGAAATTGGAAAGTTGGTCAATTTGGAATTGCTAAGGGTTAGTTCTTGTTCTGATTTAACAGAGTTTCCGGACTCAGTTTCCAGCCTTCAAAAGCTAAAATTTCTTGATATGTCTTACTGCATAAGCCTCAGTAGATTACCAGATCATATGGGTAAGTTACTTAATTTGAAAGAGCTCTACATCACGCGTTGCTCGAGATTATGTGAGCTGCCACCCACAATCATTAACCTTACGGGGCTAAGAGTTGTGGTGTGCGATGAAGATGTGGCTGCTTTATGGGAACCTTGCAAAACCATCTTTACTGATCTGCATGTAGAGGTGAACCAAGCTGATTTTAGCCTGGAATGGCTTTGA 2406 0.4352 MAETVIEFLLDELLSKVLEAKDRAIQFRPTLERMATTLRSIKPVIEEIKQYNRQLDRSEDETKKLIEDVKNGEKLVLKCSKIQWWECCYRPQYQEQLEDLDQSLVRFFQVDMPVQTARDVKETLVEVRGIHMEIKKLNAVARNERGLCSAPEPPTFTVGLDVHVGELKVRLLQDDVSAIVVTGSPGSGKTTLAKKFCWDANVRGKFKDNIFFVKFSETPNLNAIVQKLYQHNGRSVSEPQNDEEAIDLLKLLLKQIGENPTLLVLDDVWDRSESLVDNFRMQLPEYKILVTSRFAIRRFGTPYCLRPLGNEDAVKLFRDSAELRESRFDVPDHIVREIVQGCSGSPMVLNAIGRSLCGQDAVVWQSRATELSKGRPIFESNENLLAFLQKSFDVLDTKSVIKERFMDLALFPEGQKIPAASLVDMWVELYGEDDVNAMEKIYELATRNMVEIVVRKFPSGTGNFSSHFVNRHDLFQELAIHQRQISQEPLEKRKTLIIDITANELPQWWTDQKEYHIAARVLSISTDELFSSDWCNLIPTEVEVLVLNFRGKKYTIPRFIEKMNKLKVLLITNYGFHPAAELENLELLNLLPNVKRIRLERVLIPSLVEKRVHLKNLQKLSLFMCNVNEAFENCSVPVSDMMPNLVELNIDYCNMVELPVGLCGFVFLKKLSITSCHKLSALPEEIGKLVNLELLRVSSCSDLTEFPDSVSSLQKLKFLDMSYCISLSRLPDHMGKLLNLKELYITRCSRLCELPPTIINLTGLRVVVCDEDVAALWEPCKTIFTDLHVEVNQADFSLEWL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4752g00002 801 Gene3D - 393 482 IPR036388 -
Pral4752g00002 801 ProSiteProfiles RPW8 domain profile. 1 146 IPR008808 -
Pral4752g00002 801 Gene3D - 308 392 IPR042197 -
Pral4752g00002 801 Gene3D Ribonuclease Inhibitor 490 783 IPR032675 -
Pral4752g00002 801 Pfam NB-ARC domain 163 368 IPR002182 GO:0043531
Pral4752g00002 801 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 4 135 IPR008808 -
Pral4752g00002 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 406 IPR027417 -
Pral4752g00002 801 PRINTS Disease resistance protein signature 342 356 - -
Pral4752g00002 801 PRINTS Disease resistance protein signature 711 727 - -
Pral4752g00002 801 PRINTS Disease resistance protein signature 178 193 - -
Pral4752g00002 801 PRINTS Disease resistance protein signature 255 269 - -
Pral4752g00002 801 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 801 IPR039203 GO:0050832
Pral4752g00002 801 CDD AAA 166 301 - -
Pral4752g00002 801 SUPERFAMILY RNI-like 539 767 - -
Pral4752g00002 801 Coils Coil 41 68 - -
Pral4752g00002 801 Gene3D - 137 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4752g00002 Pral-Chr4752 6203 10842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4752g00002 175 767 WRKY Transcription Factor Family AT5G45050 22.890 2.21e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4752g00002 - - pcin:129321618 1325.46