Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00056 ATGATTCAGGAACTGTTGAGCGGTGCTGGCCTCATTGCAGGTGAAAGGAAAATCTCCACTAACGGAGCAGCGGGAGTTTCGCCGCTCATCACTACGCCTCATACTTCGGTTCCTTCTTCTTCATCTCACCCTTCCATCCCCACCAATACTTCTACCACCACCGCTGCCGCCACATCCACAAATTCCGAGAACCAGAACCTGAGGTGCCCTCGATGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGTGGTGCTCTCAGGAATGTTCCAATCGGAGGTGGTTGCCGGAAGAACAGGAACCTCGGCGCTTCCAACTCCGTCGTGAAGACGAGCGTGGCTAAGATGAAAACAGCTGCACCATCGGAGCTTGAAAGGTCGGTGCTCGGGGTGGCCGGGTTCATCGACCACGACCTTGCTTCAAACCCGATTCTATGGGGCTCACCGCAAAATTCTCATGTGTTAGCTTTGCTGAGAGCTAGTCAAAACCATAACCCTAACCCTAACCCTAGTCTTCCCATGTCCATTAATGCTGTTAAGGAACAAGGGACCTTGATGGTGTCCCACGCGGTAACTGAGCCAGTGGTTGGAAATGGATTGGTTAACGGTCGAGCCCTAAACTTTGATTCTGTTGGTCAATTTCCCACACTTGGGCTATGCAGCTCTATCTGGAGAAGCAGTAACAGTAATAACAACAATCAAAATGGGTTCTTAGTTGGAGAACATGAGGGCAGTGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCTTCAGCAGCTAATTATTGTAGCGACAATAACTCGTCACAGGTGTTGGGGAACATGGCTTCTTCTTCACACGCATCTTCTTCTTTATCTGCTAATTTGGGGTCTGCTCCAGTAGTTGCTGGGGATGATCAATTGGGGTATACCTGGAATCCAACTCTTTCGTGGTTTGATCTTTCCACCACCAATGGTACTTCATATCCTTAA 1032 0.4903 MIQELLSGAGLIAGERKISTNGAAGVSPLITTPHTSVPSSSSHPSIPTNTSTTTAAATSTNSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNLGASNSVVKTSVAKMKTAAPSELERSVLGVAGFIDHDLASNPILWGSPQNSHVLALLRASQNHNPNPNPSLPMSINAVKEQGTLMVSHAVTEPVVGNGLVNGRALNFDSVGQFPTLGLCSSIWRSSNSNNNNQNGFLVGEHEGSGIQELYQRLRSSSAANYCSDNNSSQVLGNMASSSHASSSLSANLGSAPVVAGDDQLGYTWNPTLSWFDLSTTNGTSYP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00056 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 56 268 IPR045174 GO:0003700|GO:0006355
Pral4750g00056 343 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
Pral4750g00056 343 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Pral4750g00056 343 MobiDBLite consensus disorder prediction 24 68 - -
Pral4750g00056 343 Pfam Dof domain, zinc finger 65 121 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00056 Pral-Chr4750 279788 281195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00056 34 131 C2C2-Dof Transcription Factor Family AT5G65590 56.863 1.10e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4750g00056 zf-Dof 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00056 - - qsu:112033100 346.28