Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00038 ATGATTTGTGGGGATATGAGGTGGAAGCGACTGGAAACTTTGTGGGTTGGCATTAGAGAAATGGGGCAAACTGGAGAAAGATGCAGAGCGTTGGAAAGACATATATATTGGACGGAATTCGCTCCCAATAGACACCAATTTTTCAAGCTAATGATGGGCGATTTCAGAAACCAGCTGCGAATTCCAAGAAAGTTTGTGAGTCATTTTAAGGAGGAACTACGGAGTGCTGCAAGACTTATAGGGCCGAGTAGAAATGTGTGGATTGTGAAAATTGCAAGAACTGATGATGATATTGTTTTTCAGATTGGTTGGGAAAAATTCGTGCAGGACCACAGTTTGGCAGAAAGAGATTTTCTTGTCTTCCACTACATTGGATACTCTTCTTTCAATGTCTCCATTTTTGATGAAACAGGATGTGAAAGAGAAGGTGCTTTTTTCGTCAATAAACACATTTCGTGCACTAGAAATGAATGCTTTCTTCAAAATGACGAGGAGAAAATTCTGCAAATTACTGATGTGGAAGAAACGGAGGGAAAGGTAAAGAAAGATAAACTAAAAGGTAGAGATGGTGAGATCGGAGAGGTGCGAGAAAGAAACCTGAAAAGCAAAACTTCGGTGCTCGTTGGAACCAGCTTTGAGGCCAGCAATTCAAACATAGAAACTTTTGGTGATAGGAAAGAAGACCTCTGGCCGAAAAGAAAAAAGTAA 708 0.404 MICGDMRWKRLETLWVGIREMGQTGERCRALERHIYWTEFAPNRHQFFKLMMGDFRNQLRIPRKFVSHFKEELRSAARLIGPSRNVWIVKIARTDDDIVFQIGWEKFVQDHSLAERDFLVFHYIGYSSFNVSIFDETGCEREGAFFVNKHISCTRNECFLQNDEEKILQITDVEETEGKVKKDKLKGRDGEIGEVRERNLKSKTSVLVGTSFEASNSNIETFGDRKEDLWPKRKK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00038 235 Gene3D - 40 139 IPR015300 -
Pral4750g00038 235 SUPERFAMILY DNA-binding pseudobarrel domain 41 139 IPR015300 -
Pral4750g00038 235 CDD B3_DNA 47 135 IPR003340 GO:0003677
Pral4750g00038 235 ProSiteProfiles B3 DNA-binding domain profile. 44 137 IPR003340 GO:0003677
Pral4750g00038 235 Pfam B3 DNA binding domain 47 136 IPR003340 GO:0003677
Pral4750g00038 235 SMART B3_2 47 137 IPR003340 GO:0003677
Pral4750g00038 235 PANTHER B3 DOMAIN-CONTAINING 42 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00038 Pral-Chr4750 202557 205735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00038 21 149 REM Transcription Factor Family AT4G33280 40.458 3.77e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral4750g00038 B3 4e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00038 - - qsa:O6P43_033778 188.734