Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00030 ATGTTTCATTACCGGAGAAGTTTCTCTATTCTTCTCACACTCTTCGTGATTTGCTCTACAAAAGCCGAAAACCAGACCACATGCCAGACCAAGTGCGGAGACAATTCCTTGCCGTATCCTTTTGGGTTCTCTGATGGTTGCCAAATCCAACTGAACTGCAGCCTCAGCAATAACCAAATGCAAATTAGGGAGTTTGTGGTTCAGAACGTAACGTCTAGCAGCATATTCATCCATCTCCTGGCGAAGTGCAACCGCACCCTGCAATCCATTGGGCCCCTTTTCTCTGCTAACTTTGCTCCCACAGAGAACAACAGCCTCCTCGTGCAAAATTGCACATCTGCTCTTGGCGGCTGCGTTATACCCACCTCAAGTTTTATGAGCAATCAGATAAAGTTGGATGGCTGTGATAACAGAAGTGATAATATAAGTTGCTTAACGCGAAGCCAAGGCCAGGAAGCTTTTGATGTTCTGAGATTTGAGGATGTGATCCAAAGTGGATGCAAGTTCTTGTTCTCGTCCATAGCTGTTGACCAGAGGAAAGAGGACCCAGATGTTTCTCTGCAGTTTCAAATGCTAGAGCTGGGGTGGTGGCTTGAAGGCCCGTGCCAATGCTCTCCCAGTGCCAAGTGTACAAATGTCACCGTGGCCCCCGGAAAGCTTGGATATCGGTGTGACTGTCCTCAAGGTTATCTTGGAGATGGGTTCTTGAATGGCACCGGTTGCCGGAGACCAGTTTCTCAGTGCAACGCTTCGACAGTGACCTCTGGAGGATGTGGAGGAGCAGTTAAAGTCGGAGTTCTTGTTGGAGGGATCACCGCTGGAGCGTTGATAGTAGCAATTCTGTGTCTCCTAGGTTATTATGTACGACGCCGTTCCTATTGTTTGAAGAAGCAAATGACTGTAAAGCGCCTGTTGCGTGAAGCTGCAGGCAACTCTAGCGTTCCTTTCTATCCTTACAAAGACATAGAGAGAGCCACTAATTTTTTCTCAGAGAAACAGAGGCTTGGAACTGGGGCTTTTGGTACAGTTTATTCAGGGAAACTCCACAATGATGATTTGGTCGCCATTAAAAAAATAAGACAGAGAGACCCCAATAGTGCTGACCAAGTCATGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCCAAATTTAGTTCGTCTACTGGGCTGCTGCATTGAAGAGGACGAGCAAATACTTGTTTACGAGTTTATGCCCAATGGAACTCTGTCTCAGCATTTACAGAGAGAGAGCGATAAAGGGCTTCCATGGACAATTCGGCTCACTATCGCCACCGAAACTGCTAATGCTATAGCATATCTCCATTCCGCCATTGACCCTCCAATCTATCACAGGGACATAAAATCCACCAATATTTTGCTGGATTACAACTTCAACTCCAAAGTGGCCGACTTTGGGCTTTCCAGGCTTGGCATGACCGAAATATCACACATCTCAACCGCCCCACAAGGGACTCCAGGCTACGTGGATCCTCAATATCACCAAAACTACCATCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTAATAGAGATAATAACAGCCCTCAAAGTGGTTGATTTTGGTCGACCTCATAATGAGGTTAATTTGGCTGCACTCGCAGTCGATAGAATCAGGAGGGGCTGTGTGGACGAGATCATAGATCCCTTCTTAGAGCCGCACAGGGATGCTTGGACGCTCTATTCTATTCACAAAGTAGCTGAGCTTGCATTCAGATGCTTAGCTTTTCATAGCGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAGCACATCAGACGCAGTGGCTGGGCAACTATGGAGGAAGCCATATGCACGGCATCGTCGGTTGGGTCGGCCCGTTCATCATTACCAGATAAAAGCGAGAAATCGTTTAGTGATGTTCAAGGTGATAAAGAACGAGTAGAGAGTGAGAGATTGAGTGTTCCAGAGAGGGCAGAGGTGAGGGATAGTTCCCCTGTATCAGTGCACGACCCTTGGTCAAGTGGACATAGCTCGTCTTCAACGAATAGCTTGTTGGGAAATGCACCTCCATGA 2073 0.4689 MFHYRRSFSILLTLFVICSTKAENQTTCQTKCGDNSLPYPFGFSDGCQIQLNCSLSNNQMQIREFVVQNVTSSSIFIHLLAKCNRTLQSIGPLFSANFAPTENNSLLVQNCTSALGGCVIPTSSFMSNQIKLDGCDNRSDNISCLTRSQGQEAFDVLRFEDVIQSGCKFLFSSIAVDQRKEDPDVSLQFQMLELGWWLEGPCQCSPSAKCTNVTVAPGKLGYRCDCPQGYLGDGFLNGTGCRRPVSQCNASTVTSGGCGGAVKVGVLVGGITAGALIVAILCLLGYYVRRRSYCLKKQMTVKRLLREAAGNSSVPFYPYKDIERATNFFSEKQRLGTGAFGTVYSGKLHNDDLVAIKKIRQRDPNSADQVMNEIKLLSSVSHPNLVRLLGCCIEEDEQILVYEFMPNGTLSQHLQRESDKGLPWTIRLTIATETANAIAYLHSAIDPPIYHRDIKSTNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIITALKVVDFGRPHNEVNLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWATMEEAICTASSVGSARSSLPDKSEKSFSDVQGDKERVESERLSVPERAEVRDSSPVSVHDPWSSGHSSSSTNSLLGNAPP 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00030 690 FunFam Wall-associated receptor kinase-like 14 296 404 - -
Pral4750g00030 690 ProSiteProfiles Protein kinase domain profile. 329 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4750g00030 690 SUPERFAMILY Protein kinase-like (PK-like) 310 602 IPR011009 -
Pral4750g00030 690 MobiDBLite consensus disorder prediction 632 664 - -
Pral4750g00030 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Pral4750g00030 690 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Pral4750g00030 690 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Pral4750g00030 690 Gene3D Laminin 202 237 - -
Pral4750g00030 690 FunFam Wall-associated receptor kinase-like 20 405 614 - -
Pral4750g00030 690 MobiDBLite consensus disorder prediction 621 690 - -
Pral4750g00030 690 Gene3D Transferase(Phosphotransferase) domain 1 405 620 - -
Pral4750g00030 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 677 IPR044652 GO:0004672
Pral4750g00030 690 Pfam Protein kinase domain 329 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4750g00030 690 MobiDBLite consensus disorder prediction 667 690 - -
Pral4750g00030 690 SMART serkin_6 329 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00030 Pral-Chr4750 175693 179671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00030 8 689 Receptor kinase-like Gene Family AT2G23450 55.460 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4750g00030 Pkinase 4.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00030 - - qsa:O6P43_024659 929.858