Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00019 ATGGAAGTGCTTCCGTGTTCTGGTGTTCAATATACTGCAGAATCTGATGGCCCTCAACAGAGTCCAGTAACATCTTTTGTTTACGAGGGAGAACCTAATTGCTCTGAAAATGGTGAACGACATGAATTGGAGGACGGTCAACTTAATGACTCATTACCTAAAATGAAAGGCCCTCAGGTGGAAGGGCAGGGTGAAGCTCAAGAGGCAGTTGGCAAACTGTCAGTTAATCCAGATTGGCAGTGCAGTGGAGCTTCAAATTGCGAATGTCAAGCTTTGGACCAAAAGGAATCTTCTAGTTTCCATGCTTTTGATGAGGATGAGATAGATGAACCTTGCTTAATCTCAGAGAACCCTGTTCCCTTTGAGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGATGGAGAGTTACCACTTGCTGAACCTAGTTGGCTGGAGGGGGATGAGTCTCTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCAGGTGTGCAAGGGCTGATTGGCCCTTATCAACTTTGAAAGCAAAACCTACTCATGGCCGGAAGAAATATTTTGTGATATTTTTTCCGCACACAAGAAATTATTCTTGGGCTGACAAGATGTTTGTTTGTTCAATTAATGCGTTACCTCAGCCTATTGCATATAAGAACCATCAAGCAGGATTGAAAATGGTGAAAGATTTGTCTGTTGCCCGACGGTTCATTATGCAGAAGCTAGTTGTTGGAATGTTGAACATCATCGATCAATTTCACTTGGATGCTTTAATTGAAGCTGCTCGTGATGTGATGTTTTGGAAGGAGTTTGCTTTGGAGGCTTCCCGAAGTAATGGTTATTCTGATCTGGGAAGAATGCTTCAAAAGCTGCAAAATAGCATAATGCAGCGCTACATAAATGCTAACTGGTTACAAAATTCTTTTCCCATTTGGATTGATCGATGCCAGAACGCAAGCAGTGCTGAATCAGTAGAACTGCTAAAGGAGGAATTGTTTGATTCTATATTGTGGAATGATATCAGCACTCTGGATGCGCCAGTGCAGCCAATATTAGGTTCTGAGTGGAAAACGTGGAAGCATGAAGTGATGAAATGGTTTTTTACCTCTCCTTCATTATCTAGCAGTAAAGACATGCAACAACAGCAGGCCTCTGATGGCCCCTTCCAAGCAAGCCTCCAAGTTTGTAGAAAAAGACCCAAGCTTGAAGTTCGTCGTGCAGAGATACATGCTTCACAAGTAGAAACTAAGGGTTCAGATCACTCTATTGCGCTTGAGACTGACCCGGGCTTCTTTAATAATCAGGAGACAGTGAATACATTAGCCACTGAGACATGTAAACGGGAAGAACTTAGGGAGGCATCTATTCCAATTGATTCACCAGGTAATTTAGTGAACAAATGGAACGACATTGTTTTTGAGTCTGCTGCAGATTCTGAGTTCTTGCATACCAAAGCTATGGAATCAACACCTACCAGTGAAATGGTTGCTCCCAAATCTGTAGAACCTGGTAGTAAGAATCGGCAATGTGTGGCTTATATAGAAGCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGTCCTCCCGGTTTTTAGGCAGCTCTGCTAGAGCAGAGAGACCTGCTTCAGTTGATGCTCCTCTGTGTGAAGGCACAACTGTTCTTGGCACCAGATGCAAGCATCGGGCCCTTCCTGGTTCTTCATTCTGTAAGAAACACAGGCCCCATGCTGAAACAGACCACACTCCAAATATGCCCCAGACTTCCTTAAAGAGGAAGCATGAAGAAAATTACACTGGTTTGGAGAGCATGTCCTGCAAAGAGATAGTGCTGGCAGATGCTGAAAGTCCTTTGCAGGTGGATCCAGTTTCAGCCATGGATGATGATACCTTCCATGGAAACACCAACTTGAATGGGAAACCCATGAATTTAGGAAATGATCATAATGAAATGGAGGAACTTCACTGTATAGGCTCGTCTCCCTTTGATGACAAGAACTCCTGTTTGGAAACTCCCAAGCGGTATTTCTTGTATTGTGAAAAGCACTTGCCAAGTTGGCTCAAACGTGCACGAAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTCGCAGAACTTTTGAGGGACTGTTTGTTACAGGAGCAGAAAGTAAATCTGCATAAAGCATGCGAGCTCTTTTACAGGCTATTTAAAAGCATTTTATCCCTAAGAAACCCAGTTCCTAAAGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAAAGATACGGGTGTCAGAGAATTCTTTAAGAAGTTGATTCATAGTGAAAAAGAGAGAATCAAAATGATCTGGGGTTTCAACGATGAGAAAGATGCACCTTCACTCATGGAAGAAATACCTCAGTTACCATCCACTGTTAATGATAGCTTTGGTAATGAAAATGCCATTAAGTGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGCAGCCATTGGATGGAAAACCATAAAAAGGAATCACAGTGGCTGTTTAGAGGTTATGCATGTGCTATTTGCCTGGATTCTTTCACCAACAAGAAAGTCTTGGAAAACCATGTCCAAGAGAGACACCATGTCCAATTTGTTGAACAATGTATGCTTTTGCGGTGCATTCCTTGTGGTAGCCATTTTGGAAATACTGAACAGCTATGGCTGCATGTTCTATCAGTTCATCCTGTCAATTTTAAGGCATCAAAAGCTCCTGAGCAGCAAACTTTGTCTCCTGGTGAGGACTCTTCAATACAACTAGAAGCTGAGCAGGTAAACTCAGCCTCTTTGGAGAATAATTTGGAGAATTCAGGTGGTTCACGTAAGTTTATTTGTAGGTTTTGTGGGTTGAAGTTTGATTTACTGCCTGACCTTGGTCGCCATCATCAAGCTGCTCATATGGGGCCTAATTTAGTTAGCAGCCATCCCTCCAAGAAGGGAGTTCGTTATTATGCATATAGATTAAAATCTGGCAGGCTTAGTCGTCCTAGATTCAAAAAAAGCCTGGTGTCAGCATCATATCGGATCAGAAGTAGAGCTAGTGCCAATTTGAAGAGACGCATTCAAGCATCAAAGTCGCTTGGCATTGGGGGAATAACCATACAACCTCAAGTAACTGAGACAACAAATATTGGTAAGTTGGCAGAATATCAATGCTCTGCTGTTGCCAAGATTTTGTTTTCTGAGATCCAAAAGACTAAGCCTCGGCCAAACAATCATGATATTCTATCAATTTCTCACTCTGCCTGCTGCAAAGTTGGCCTTCAAGCTGCACTGGAGGAGAAATTTGGAACTCTGCCTGAAAAGCTGTATCTCAAGGCTGCAAAACTTTGCAGTGAACATAATATTCTAGTGAGCTGGCACCAGGAAGGGTTTCATTGTCCTAGAGGTTGCAAGGTGTGCAAGGACCAACCTTTGCTTTCTCCCTTAGCATCCCTTCCTAATGGCTTTGTAAAGCAAAAGGCTTTAGATATGTCAGATCTTGCAGTAGATGAGTGGGAGGTGGATGAGTTTCATTACACCATCAATTCGCACCATTTAAAACCAGAATCCTTGCAAAAGGCTGTAGTCTTGTGTGATGACATAAGCTTTGGGAAGGAAGCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTCAAAATCCACCTCATATGTGTAGGTCTAATGAACATGATATGAATCTTTCTATGCCATGGGAGAGCTTTACCTACATTACGAAGCCAGTGCTTGATCAATCCCTGCATCTTGATTCAGAGAGTCTTCAAATGGGATGTTCCTGTTCATATTCTACTTGCAGTGCTGAAACTTGTGCTCATGTATATCTTTTTGATAACGACTATGAAGATGCAAGGGACATCTTTGGAAAATCAATGCGCGGCAGATTCCCATATGATGAGAATGGTCGAATGATTTTGGAGGAAGGTTACCTAGTCTACGAGTGCAACTATAGGTGCAGATGTAATAAAACCTGTCCAAACAGAATTTTGCAAAATGGAGTTCGAGTTAAATTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCTGTTAGGGCTGGTGAAGCCATCCTACGTGGCACATTTGTGTGTGAGTATGTGGGAGAGGTTTTAAATGAGCAGGAGGCACATAACAGGCGCAAGAGGTATGGCATAGAAGGTTGCAGTTATTTCCTTGATATTGGTGCTCATATTAATGATATGAGCAGATTGATTGAAGGACAGGGTCGATATGTTATTGATGCTTCTAGATATGGAAATGTTGCGAGGTTCATCAATCACAGGTAA 4332 0.4231 MEVLPCSGVQYTAESDGPQQSPVTSFVYEGEPNCSENGERHELEDGQLNDSLPKMKGPQVEGQGEAQEAVGKLSVNPDWQCSGASNCECQALDQKESSSFHAFDEDEIDEPCLISENPVPFEDTIESESPNNSRDGELPLAEPSWLEGDESLALWVKWRGKWQAGIRCARADWPLSTLKAKPTHGRKKYFVIFFPHTRNYSWADKMFVCSINALPQPIAYKNHQAGLKMVKDLSVARRFIMQKLVVGMLNIIDQFHLDALIEAARDVMFWKEFALEASRSNGYSDLGRMLQKLQNSIMQRYINANWLQNSFPIWIDRCQNASSAESVELLKEELFDSILWNDISTLXDAPVQPILGSEWKTWKHEVMKWFFTSPSLSSSKDMQQQQASDGPFQASLQVCRKRPKLEVRRAEIHASQVETKGSDHSIALETDPGFFNNQETVNTLATETCKREELREASIPIDSPGNLVNKWNDIVFESAADSEFLHTKAMESTPTSEMVAPKSVEPGSKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSARAERPASVDAPLCEGTTVLGTRCKHRALPGSSFCKKHRPHAETDHTPNMPQTSLKRKHEENYTGLESMSCKEIVLADAESPLQVDPVSAMDDDTFHGNTNLNGKPMNLGNDHNEMEELHCIGSSPFDDKNSCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRDCLLQEQKVNLHKACELFYRLFKSILSLRNPVPKEVQFQWALTEASKDTGVREFFKKLIHSEKERIKMIWGFNDEKDAPSLMEEIPQLPSTVNDSFGNENAIKCKICSAEFPDDQALGSHWMENHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHHVQFVEQCMLLRCIPCGSHFGNTEQLWLHVLSVHPVNFKASKAPEQQTLSPGEDSSIQLEAEQVNSASLENNLENSGGSRKFICRFCGLKFDLLPDLGRHHQAAHMGPNLVSSHPSKKGVRYYAYRLKSGRLSRPRFKKSLVSASYRIRSRASANLKRRIQASKSLGIGGITIQPQVTETTNIGKLAEYQCSAVAKILFSEIQKTKPRPNNHDILSISHSACCKVGLQAALEEKFGTLPEKLYLKAAKLCSEHNILVSWHQEGFHCPRGCKVCKDQPLLSPLASLPNGFVKQKALDMSDLAVDEWEVDEFHYTINSHHLKPESLQKAVVLCDDISFGKEAVPVICVVDQELQNPPHMCRSNEHDMNLSMPWESFTYITKPVLDQSLHLDSESLQMGCSCSYSTCSAETCAHVYLFDNDYEDARDIFGKSMRGRFPYDENGRMILEEGYLVYECNYRCRCNKTCPNRILQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYVGEVLNEQEAHNRRKRYGIEGCSYFLDIGAHINDMSRLIEGQGRYVIDASRYGNVARFINHR 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00019 1444 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1443 - -
Pral4750g00019 1444 SUPERFAMILY SET domain 1202 1443 IPR046341 -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 113 141 - -
Pral4750g00019 1444 ProSiteProfiles Pre-SET domain profile. 1274 1350 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4750g00019 1444 ProSiteProfiles Zinc finger C2H2 type domain profile. 856 879 IPR013087 -
Pral4750g00019 1444 Gene3D SET domain 1189 1444 IPR046341 -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 634 657 - -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 1 71 - -
Pral4750g00019 1444 ProSitePatterns Zinc finger C2H2 type domain signature. 824 845 IPR013087 -
Pral4750g00019 1444 ProSiteProfiles Zinc finger C2H2 type domain profile. 961 989 IPR013087 -
Pral4750g00019 1444 SMART preset_2 1210 1337 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4750g00019 1444 ProSitePatterns Zinc finger C2H2 type domain signature. 892 913 IPR013087 -
Pral4750g00019 1444 Pfam SET domain 1364 1443 IPR001214 GO:0005515
Pral4750g00019 1444 Gene3D Classic Zinc Finger 807 882 - -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 34 49 - -
Pral4750g00019 1444 SMART c2h2final6 961 984 IPR013087 -
Pral4750g00019 1444 SMART c2h2final6 890 913 IPR013087 -
Pral4750g00019 1444 SMART c2h2final6 856 879 IPR013087 -
Pral4750g00019 1444 SMART c2h2final6 822 845 IPR013087 -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 582 606 - -
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 12 31 - -
Pral4750g00019 1444 Pfam Pre-SET motif 1213 1345 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4750g00019 1444 ProSiteProfiles SET domain profile. 1353 1444 IPR001214 GO:0005515
Pral4750g00019 1444 MobiDBLite consensus disorder prediction 641 655 - -
Pral4750g00019 1444 ProSitePatterns Zinc finger C2H2 type domain signature. 963 984 IPR013087 -
Pral4750g00019 1444 Pfam Zinc finger C2H2-type, 3 repeats 858 985 IPR040689 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00019 Pral-Chr4750 110608 120471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00019 135 1443 C2H2 Transcription Factor Family AT2G23740 51.247 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4750g00019 Pre-SET 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00019 - - gmx:100786757 2159.41