Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00017 ATGGGAATAGCAGCACCGCCACTTGCATCAATAATCTCTCACTCAAAGTGCAAGAGCCACCATTCCTTTTTTACCGTCGACAATAAGTCCGATTTTTCCAATTCTATGTCCATGTCCCAAGATTATCATCAGGCAGGAATCTTCAGCTTCTCGAATGGATTCGAGAGATCCACTGCAACTCAGCAACCTCATCAGCAGGCGCAGATCCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGACCCACCACCACCGTTAGTGGGTATTGAGGAAGAGGAATCCGGAGGCCTTCCCGTGTACGAAACCGCCGGGATGCTATCCGAGATGTTTAGTTTCCCTCCTTCCGGCGCCACCTCTTCAGAATTGTTGGAACAACAACACTTGACGGCGACGTATCGATCGTTCAGCAGGCCACAACAGCAGGCTACTGCGATGGGCAGTGAGTGGTACGGAGACCAACAAGGCATGATAAGTGGTCTTGGAGATTCGAAGAATCACCACCACCACCGTCCTCATCAGCGTCAGATTTCAAGCATGAATGCGGCGGATTCAGCGGCTGCCATGCAGCTTTTTCTGATGAATCCTCAAACAAGATCGCCTTCCCCTCCTCACAATCCTTCCACTAGTTCTTCCACCCTCAACATGTTGCTCCCCAATCCTTCCTCTTCTCTGCAACAATTCCCTGCAGGCCCCGGAACGGGAGGAGCTTTTGGTCAATTCACCTGGATTCCGTTTTCTGAATCAGGTTCTCAAGAAGTAGGAACCAACGCCAACACCAACCAGAATCCGGGTGAAATCGGAGGGGTTGTGGAAGGCCAGGGCCTTTCTTTATCGTTGTCGTCTCCTTTAGAAGCAGCGAAAGCCGAGGAACTAAGGATGAGCGATAGCGGGTTTCTTAATTATTACAGTCAAAGTGCGGCAGGAGGGTCCTCATCTGCTCAGTATCCGTACAAGAATTTGGGAGGAGGTCAAACTCAAACTCACACATTGCATTTACAAGGAATAGCGCAGAACCACCAAGTCCATGCTGGTTTCGGGTCATCGTTAGGGATTGCAAATGTGCTGAGGAACTCTAAGTATGTGAAGCCCGCTAAAGAGTTGCTTGAAGAATTCTGCAGCGTTGGGAGGGGTCAATTCAAGAAGAACAAATTCAGCAGGCAGAACTCCAACCCTAATTCCAATTCCGGTGTTGGTGCCGCTGCTTCTTCATCCTCAACAAAAGATCCTCCACCTTTGTCAGCCGCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTCTCCATGCTTGACGAGGTGGACCGAAGATATGGTCACTACTGCGAGCAAATGCAAATGGTAGCGAACTCATTTGACTTGGTGATGGGTTTTGGGGCGGCGGTGCCATACACGGCGCTGGCACAGAAAGCAATGTCAAGGCATTTCCGATGTCTGAAGGATGCCATATCAGCACAACTGAAGCACAGTTGCGAGTTGCTGGGCGAGAAAGACGGGTTGGGTTCGTCGGGTTTGACTAAGGGTGAGACTCCAAGGTTGAAGCTGCTGGAGCATAGCCTGAGGCAGCAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGAGGTCTTCCCGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCACTTCCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTAGCCTATCAAGAAATCAGGTATCAAACTGGTTCATTAACGCGAGGGTAAGGTTGTGGAAACCTATGGTGGAGGACATGTATCAGCAAGAGCTTAAAGAAGCGGAGGACGCGGAAGAGAGAGAAATGAATCAAAGTAACAGCAACAATAGTGGCAACAACACGGCTCAAACGCTTACCACCACCACAACCACGGCTACTACCACATCAACAGCGACGGCGTCAGCGTCAGTGCCACCAACAACGCCGCCAGCCAAAAGATCGGACGTCAATGCCTCCGAAAGAGACCCCCAACTCGTGGCAATCAACAGACAAGCCCTCTTGGAAAACCAAGCAAAGCAACAGTCGTCCACCACCACCGCCTCTGAGGTGGCGCCGCCCGTGTCCCAATGCTTCCAATCAGACCTGCCTCTGCAGGGTCATGATGACACGTGTCGGCGTGGCAGCATGGTTGCAGAAGACTGCGGGACCGCCTCGGCCACTGCTAACAATATCGGATCTACTCTCATTAGGTTCGGGACCACCGCCGGTGATGTGTCGCTCACCCTAGGGCTACACCACGCCGGGAACATCCCTGACACTTCTCCTTTCTCTGTTAGAGATTTTGGAGGCATTTGA 2340 0.5175 MGIAAPPLASIISHSKCKSHHSFFTVDNKSDFSNSMSMSQDYHQAGIFSFSNGFERSTATQQPHQQAQIRRDKVRVQGFDPPPPLVGIEEEESGGLPVYETAGMLSEMFSFPPSGATSSELLEQQHLTATYRSFSRPQQQATAMGSEWYGDQQGMISGLGDSKNHHHHRPHQRQISSMNAADSAAAMQLFLMNPQTRSPSPPHNPSTSSSTLNMLLPNPSSSLQQFPAGPGTGGAFGQFTWIPFSESGSQEVGTNANTNQNPGEIGGVVEGQGLSLSLSSPLEAAKAEELRMSDSGFLNYYSQSAAGGSSSAQYPYKNLGGGQTQTHTLHLQGIAQNHQVHAGFGSSLGIANVLRNSKYVKPAKELLEEFCSVGRGQFKKNKFSRQNSNPNSNSGVGAAASSSSTKDPPPLSAADRIEHQRRKVKLLSMLDEVDRRYGHYCEQMQMVANSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCELLGEKDGLGSSGLTKGETPRLKLLEHSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTSLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEDAEEREMNQSNSNNSGNNTAQTLTTTTTTATTTSTATASASVPPTTPPAKRSDVNASERDPQLVAINRQALLENQAKQQSSTTTASEVAPPVSQCFQSDLPLQGHDDTCRRGSMVAEDCGTASATANNIGSTLIRFGTTAGDVSLTLGLHHAGNIPDTSPFSVRDFGGI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00017 779 MobiDBLite consensus disorder prediction 194 230 - -
Pral4750g00017 779 Pfam Associated with HOX 353 483 IPR006563 -
Pral4750g00017 779 MobiDBLite consensus disorder prediction 609 668 - -
Pral4750g00017 779 MobiDBLite consensus disorder prediction 381 418 - -
Pral4750g00017 779 Pfam Homeobox KN domain 553 592 IPR008422 GO:0003677|GO:0006355
Pral4750g00017 779 SMART HOX_1 536 600 IPR001356 GO:0003677
Pral4750g00017 779 Coils Coil 599 623 - -
Pral4750g00017 779 MobiDBLite consensus disorder prediction 194 228 - -
Pral4750g00017 779 Gene3D - 539 601 - -
Pral4750g00017 779 SMART prehox3 348 484 IPR006563 -
Pral4750g00017 779 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 192 623 - -
Pral4750g00017 779 MobiDBLite consensus disorder prediction 152 178 - -
Pral4750g00017 779 MobiDBLite consensus disorder prediction 381 409 - -
Pral4750g00017 779 CDD homeodomain 536 597 IPR001356 GO:0003677
Pral4750g00017 779 FunFam BEL1-like homeodomain protein 4 539 601 - -
Pral4750g00017 779 ProSiteProfiles 'Homeobox' domain profile. 533 596 IPR001356 GO:0003677
Pral4750g00017 779 MobiDBLite consensus disorder prediction 618 662 - -
Pral4750g00017 779 SUPERFAMILY Homeodomain-like 538 603 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00017 Pral-Chr4750 83888 90171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00017 37 583 Homeobox Transcription Factor Family AT4G36870 51.557 1.67e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral4750g00017 POX 3.6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00017 - - jre:108995343 908.672