Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4750g00007 ATGGCTCATAGCTGCCAAGCCTACCTCACCTTCCGATCTCAACCCATTTACTACTCTGTTTCCACAATTTCTGCCTTGCTTGGCTCTGACCCATCTCAACTTGCTGAAATCAACTCAGTTTCTCTGAACGCCACCTTTGCGAAAGATCAATTGGTGATTGTTCCCGTCAACTGCTCCTGTGCAAGTGATTATTACCAGACCAACACTTCCTACACTATCCACAGCACAGACACGTATTTTTTGATTGCTAACGACACTTTCCAAGGCCTCTCAACCTGTCGAGCTCTGATTAAGGAAAACAACATTCCTGGAGATTTGTTTCCCGGCACAAAACTTACAGTCCCTCTTAGATGTGCTTGTCCCACAAAAAATCAAACTGACAAAGGCGTCAAGTACTTATTGAGTTACTTGGTCACCTGGGGTAATTCTGTTGCCGCCATCAGTAAAAGATTTGGGGCACCCACTGATCTCACTCTCGAATCAAATAGCCTTTCTGCTCAAGATTGGATTTATCCCTTTACCACACTTTTAGTGCCTCTTAAACACAAACCCAACATCTCTCGAATCGTTGTGTCTCCTCCTCCACCATCTCCGACATCCCCACCGTCTTCTTCTCCATCCGGTGGCAGCACAAATAAGACATGGATATATGCAGTGGTTGGAGCTGTCGGAGGTATTGCCTTGATATCACTCCTGCTCCTTGGTATACTTGTTTTCCGTAAACGGTATCCTATTCTTAGGAGCGAAAAGAAAGATGATTCTGCCATATTGTCAGAAAGTTTCGAGGCAACAGGGAAGCCAGAAGTAAAAAACGCCGGGGAAGAGTCGGAAACGTTGTCTGAGATAATATCCGACATAGCTCAGTCTTTCAAAGTGTATGGATTTAAGGAACTACAGCGGGCAACGGATAATTTTAGTTCAAACTGCTGCATCAGAGGGGGTGTTTACCGCGGTGTGATTAATGGTGATTTGGCTGCCATTAGGAAGATGGATGGCGACGTGTCCAAAGAGATAGCAATTCTTAGCAAAGTCAACCACTCTAATGTGATACGCCTTTCGGGGGTCAGCTTCAGCGAGGGCCATTGGTTCCTGGTTCATGAGTATGCAGCTAATGGATCCTTGACTGATCGGATCTACGTCAACAACACGGATGGCAAGTTTTTGACTTGGAGTCAGAGAATGCAAATAGCATTGGACGTGGCCACAGGACTCGACTATCTCCATAGTTTCATTTCTCCTCCTCTTATCCACAAGGATCTCAAGAGTGATAACATCCTTCTGGATGCTGATTTGAGGGCCAAGATTGCTAACTTGGGGCTCGCAAGGTCAGTAGAAGGCGAGGATGATCAGTTCCCCGTGACGAGGCATATTGTTGGAACAAGAGGCTATATGGCACCTGAGTATCTAGAAAATGGCATAGTCTCAACAAAACAAGATGTGTATGCATTTGGGGTTGTCATGCTGGAAATATTAAGCGGAAAAGAGGTTGCTGCTGTTCATTCAGGAGATAAAGGGAGTTTGTCGGATGTTTTAAGTGTGATTCTTGATGCGGACTGTGAAGAGGAGAAGCTGAGGGATTTTATGGATCCTCGCCTGGTCGGAAAGTTTCCACTGGAACTTGCTGGGTTTGTGGTTAGAATGATTGATAATTGCTTGAGGAAAGATCCAGCGAGTCGCCCTGCCATGCATGACATTGTGTCGTCTCTCTCTGTAACGTTGAACTCTTCATTGGCCTGGGAAAGATCAGTGACCATCTCAGGAGACCAGAGCTTCAGCAGAAGCTCTTAA 1788 0.4569 MAHSCQAYLTFRSQPIYYSVSTISALLGSDPSQLAEINSVSLNATFAKDQLVIVPVNCSCASDYYQTNTSYTIHSTDTYFLIANDTFQGLSTCRALIKENNIPGDLFPGTKLTVPLRCACPTKNQTDKGVKYLLSYLVTWGNSVAAISKRFGAPTDLTLESNSLSAQDWIYPFTTLLVPLKHKPNISRIVVSPPPPSPTSPPSSSPSGGSTNKTWIYAVVGAVGGIALISLLLLGILVFRKRYPILRSEKKDDSAILSESFEATGKPEVKNAGEESETLSEIISDIAQSFKVYGFKELQRATDNFSSNCCIRGGVYRGVINGDLAAIRKMDGDVSKEIAILSKVNHSNVIRLSGVSFSEGHWFLVHEYAANGSLTDRIYVNNTDGKFLTWSQRMQIALDVATGLDYLHSFISPPLIHKDLKSDNILLDADLRAKIANLGLARSVEGEDDQFPVTRHIVGTRGYMAPEYLENGIVSTKQDVYAFGVVMLEILSGKEVAAVHSGDKGSLSDVLSVILDADCEEEKLRDFMDPRLVGKFPLELAGFVVRMIDNCLRKDPASRPAMHDIVSSLSVTLNSSLAWERSVTISGDQSFSRSS 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4750g00007 595 ProSiteProfiles LysM domain profile. 134 178 IPR018392 -
Pral4750g00007 595 Pfam LysM domain 71 115 IPR018392 -
Pral4750g00007 595 Pfam LysM domain 136 179 IPR018392 -
Pral4750g00007 595 SMART serkin_6 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4750g00007 595 MobiDBLite consensus disorder prediction 189 209 - -
Pral4750g00007 595 Gene3D Phosphorylase Kinase; domain 1 276 368 - -
Pral4750g00007 595 Gene3D Transferase(Phosphotransferase) domain 1 370 584 - -
Pral4750g00007 595 FunFam PTI1-like tyrosine-protein kinase 3 369 583 - -
Pral4750g00007 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Pral4750g00007 595 Pfam Protein kinase domain 330 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4750g00007 595 Gene3D LysM domain 65 128 IPR036779 -
Pral4750g00007 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 581 - -
Pral4750g00007 595 MobiDBLite consensus disorder prediction 189 203 - -
Pral4750g00007 595 ProSiteProfiles Protein kinase domain profile. 228 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4750g00007 595 SUPERFAMILY Protein kinase-like (PK-like) 288 569 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4750g00007 Pral-Chr4750 44497 62746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4750g00007 1 582 Receptor kinase-like Gene Family AT2G23770 43.824 8.44e-155 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4750g00007 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4750g00007 - - gmx:100815842 711.064