Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4748g00044 ATGGCCTTTTCTCCATCATCTTCTTCGGACACAACCTGGTGGCTCTTCACACTTCCAGCCATAACAGGAACCCACCACTACTCCCATGACACTTTCCTTCTCTTCTTCGTCCCTTTGCTTCTTTTCTTATTAGGGTTCCTTTCATGGACTTTCTCTTCTGGAGGCCTAGCTTGGAAAAATGGCAGGACCATCTTGGGTCGGGTCGCTATACCAGGACCCAGAGGTGTCCCTATATTTGGCAGCTTATTCAGTTTGAGCTACGGCTTGGCTCATCGTACTCTTGCTTCTTTGGCTAACTCCCTAGCCGCCAAACAGCTCATGGCTTTCAGCTTGGGCTCAGTCCCGGCCGCCATCACTTCCGATCCTCACATAGCACGCGAAATTCTGACGTCACCCCACTTTGCCGACCGCCCCGTCAAGCAATCGGCCAAGACCCTCATGTTCAGCCGAGCCATTGGGTTTGCTCCAAATGGCTCTTACTGGCGGCTGCTCCGTAGGATCGCCTCCGCTCATCTCTTCTCACCGAGGCGCATTGCCGCCCATGAGACTGGCCGTCTCCTCGACTGCTCCACCATGTTACGAGCCATAGCTGCTGAGCAGTCCGAAAACGGCGTCGTTGCCTTAAGGAAACATCTTCAAGCTGCGGCTCTTAATAACATCATGGGCACCGTTTTTGGTAAAAGATATGCGTACAATTACCCCCATAGCTTTGACTTGGAGGTTAAGGAACTGCATGAAATTGTGAGGGAGGGGTTTGAGCTGTTAGGCGCATTTAACTGGTGTGATTATGTGCCATGGATGAGCTTGTTTTATGACCCTTCTGGGATCAAAGAACGGTGCAGAGATCTTGTTCCTCGCGTGAGGAAGTTTGTGAAAGGCCTCATAGACGAACACCGATTGGCTGCTTCTTCATCATCCAACAAGCTTTGTGATAGCTCGGACTTTGTGGATGTTTTGCTATCCCTAGATGAGCCAGACGAGAAGCTCCATGAAGATGACATGATTGCTGTTTTATGGGAGATGATATTTCGTGGTACTGATACAACGGCACTTCTAACCGAGTGGGCAATGGCGGAACTGGTTCTGAACGGACACGTTCAAGCGAGGCTCCGCGAAGAAGTTGACGAGGTTGTGGGAGACAAAGATGACGTCACCGATTCCGACGTGGCGAAAATGCCCTACCTTCAAGCTGTCATGAAGGAGACCCTGAGGGTGCACCCACCTGGCCCGCTCCTTTCGTGGGCCCGACTCTCCACGTCAGACGTCCAGCTCAGCAACGGCATGGTGGTCCCAGCCCACACGACTACTATGGTGAACATGTGGGCTATAACCCACGACCCAGAGGTGTGGGACGATCCATTAGCGTTCAAACCAGAAAGGTTCGTCCCAAGCGAAGGAGGAGCTGACGTGGACGTCCGAGGTGTTGACCTGAGGCTCGCACCGTTTGGAGCCGGGCGTAGGGTTTGTCCAGGGAAGAACCTGGGGCTCGTCACTGTGAACCTGTGGGTGGCTAAGTTGGTTCGCCAGTTTGAGTGGATTGAAGGCCAGGCTAATCCAGTTGACCTAACAGAGCAGCTTAACTTATCATGTGAGATGAAGAACCCTCTCAAGGCCGTGGCCATTCCTAGGGCTATTTAA 1638 0.5244 MAFSPSSSSDTTWWLFTLPAITGTHHYSHDTFLLFFVPLLLFLLGFLSWTFSSGGLAWKNGRTILGRVAIPGPRGVPIFGSLFSLSYGLAHRTLASLANSLAAKQLMAFSLGSVPAAITSDPHIAREILTSPHFADRPVKQSAKTLMFSRAIGFAPNGSYWRLLRRIASAHLFSPRRIAAHETGRLLDCSTMLRAIAAEQSENGVVALRKHLQAAALNNIMGTVFGKRYAYNYPHSFDLEVKELHEIVREGFELLGAFNWCDYVPWMSLFYDPSGIKERCRDLVPRVRKFVKGLIDEHRLAASSSSNKLCDSSDFVDVLLSLDEPDEKLHEDDMIAVLWEMIFRGTDTTALLTEWAMAELVLNGHVQARLREEVDEVVGDKDDVTDSDVAKMPYLQAVMKETLRVHPPGPLLSWARLSTSDVQLSNGMVVPAHTTTMVNMWAITHDPEVWDDPLAFKPERFVPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLVTVNLWVAKLVRQFEWIEGQANPVDLTEQLNLSCEMKNPLKAVAIPRAI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4748g00044 545 Pfam Cytochrome P450 71 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS P450 superfamily signature 489 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS P450 superfamily signature 480 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 Gene3D Cytochrome P450 66 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 479 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 489 512 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PRINTS E-class P450 group I signature 396 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 CDD CYP78 103 536 - -
Pral4748g00044 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 482 491 IPR017972 GO:0005506|GO:0016705
Pral4748g00044 545 SUPERFAMILY Cytochrome P450 70 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4748g00044 545 PANTHER CYTOCHROME P450 78A7-RELATED 9 543 - -
Pral4748g00044 545 FunFam Cytochrome P450 78A5 62 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4748g00044 Pral-Chr4748 178852 181293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4748g00044 7 539 Cytochrome P450 AT5G09970 66.231 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4748g00044 K20619 - qsa:O6P43_008036 771.541