Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4748g00038 ATGGGTTTGGAATCAGATTCCGACTGTTTCGGCAAAATGATGGCTTCGATGCCGGGGTTTCGCTTCCACCCTACGGACGAGGAGCTGGTCATGTATTATTTGAAGAGGAAGATGTCGGGGAAGAAGCTAAAGCTCGACGTGATCCGGGAGACTGACGTCTACAAGTGGGAGCCTGAGGAATTGCCTGCACAATCTCAACTAAAAACTGGAGATAGACAATGGTTTTATTTCAGTCCCAGAGATAGGAAGTACCCTAATGCTGCAAGGTCAAGTAGAGCAACAACACAAGGATACTGGAAAGCTACAGGAAAAGATCGTAATGTGACATACACTTCCCGAACAGTTGGAGTTAAAAAGACACTGGTTTTTTATAAAGGCAGGGCGCCTAATGGTGAGCGCACTGATTGGGTTATGCATGAATACACCTTGGATGAACGAGAGCTTCAAAGATGCCAGGGCATTAAGGAGTATTTTGCACTCTACAAGCTTTACAAGAAAAGTGGACCTGGCCCTAAAAATGGTGAGCAGTATGGTGCACCATTTAATGAAGAAGAGTGGGCAGATGATGATTTTGTAGATCGTAATGTAAACTCAGCTGACTGTGAAGTTACAACACAGCAACCTGATGGCGTTACTTCTGTTGATGCCGTCAATGTTAATGATCCACTACAACCGTTGCTCGATGATGAAATTGAGGAGATCATGAAGAAACTTATGGAAGATGAATCTCTCCTCGAACAGCAAAATGTGAACAGTCATCCCGCCTTACCTCTGGGGGTTGCTGAGGAAACGCTGAATGGCGTGGTTGATCAACTCTGTAGGGAAGTCATGTTTCCTGAGCCATTTGGAATTTTTCACTTGAGCGGTGATCAGCAATGTGGAGTGGGTCCCAGTTCTGACTTCCCTCAGTCAGCTATTTCTCACCTGCAAATGTCTGAAGCTCCTGAGGTCACTTCTACTCCCAACACTAAAGGCACTCCCAACACTAAAGGAGCGGAAACTGGCTTTTGTGAGGATGACTTCTTGGAATTGGATGATCTCATTGGCCCAGAAGATGCATTGCTAAACATCAATAAGCCTGTGGAGAACCTGCAGTTTGAAGATGGATTAAGTGAACTTGATCTGCACCATGATGCGCAGATGTTTATTCATGACATGGGGCCAATTTCATATCCATATATGAACACTCTGGATAGTACTATCGCAGATCAAAATTATGAGCTGCTGTCCAATCAAGAAAATGAAAATCAAACTGGTGAACTCATGATGCATGCTCAAAGAAACATCCTGCACTCAGCAGAACCCATCAATATTTCTACATCTCTGCCAACATCAGGTATATGTTATGAGTCTGCCAGCTTTCCTGTTGAAGGCAATGAAACTCAAGATAGCACCGTCGGAGGTGTTGCTGCAAGTAAATTATCTTCTTCTCTCTGGAACTTTGTTGAGTCAATACCAACCACTCCTGCATCAGCATCTGAAAATGCTTTGGTGAATCGGGCCTTCGAGCGGTTGTCTAGCTTCAATAGGTTGAAGATCGGTGTTGAGGAAACAAACGTTGCTGCAGGTAATGACACTGCAAGTATGAAGAGAGCGGGCAAGAAAGGGGTTATCTTCTTTTTCTTTCCGGTTCTTGTTGCCTTGTGTGCTTTCTTATGGGTTTCTCTAGGAACCTTAAGACTATTAGGTGTACCTAACTCTTGA 1704 0.4425 MGLESDSDCFGKMMASMPGFRFHPTDEELVMYYLKRKMSGKKLKLDVIRETDVYKWEPEELPAQSQLKTGDRQWFYFSPRDRKYPNAARSSRATTQGYWKATGKDRNVTYTSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDERELQRCQGIKEYFALYKLYKKSGPGPKNGEQYGAPFNEEEWADDDFVDRNVNSADCEVTTQQPDGVTSVDAVNVNDPLQPLLDDEIEEIMKKLMEDESLLEQQNVNSHPALPLGVAEETLNGVVDQLCREVMFPEPFGIFHLSGDQQCGVGPSSDFPQSAISHLQMSEAPEVTSTPNTKGTPNTKGAETGFCEDDFLELDDLIGPEDALLNINKPVENLQFEDGLSELDLHHDAQMFIHDMGPISYPYMNTLDSTIADQNYELLSNQENENQTGELMMHAQRNILHSAEPINISTSLPTSGICYESASFPVEGNETQDSTVGGVAASKLSSSLWNFVESIPTTPASASENALVNRAFERLSSFNRLKIGVEETNVAAGNDTASMKRAGKKGVIFFFFPVLVALCAFLWVSLGTLRLLGVPNS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4748g00038 567 Gene3D NAC domain 25 168 IPR036093 GO:0003677|GO:0006355
Pral4748g00038 567 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 239 - -
Pral4748g00038 567 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Pral4748g00038 567 FunFam Nac domain-containing protein 86 25 169 - -
Pral4748g00038 567 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Pral4748g00038 567 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4748g00038 Pral-Chr4748 148926 152652 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4748g00038 1 563 NAC Transcription Factor Family AT1G34190 40.789 7.03e-125 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4748g00038 NAM 4.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4748g00038 - - gmx:100794925 669.463