Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4748g00032 ATGGATGTGATGGATATCAGTAATGGTTCTACGGCAAAGGAGCATCGCAAACCTCATGAATCAGTTTCAAAAGGTGCAGATTCGTTATCCGTTTCTCCACTGCAAACTTCTCCAAAGTCACCGAGACCCTGTGGCTCTCCAAGGTCCCCCAGGTTCCAAGTCAAGGGCGGCAAGCAGAGTTCAAATCATGAGAAGCATCCACAATCTCCAAGAGATGGATGTCCCAAGAAAGATTCATTCCCCGTTTCTTCCCTGAAAATCTCTCCTAAGTCACCAACATCCCCCACTTCTCCAAAGTCTCCAAGGTTACCTGGCCATAGTCCAAAGAATGAAAGGCAATCACGTTCTCCAAGAGATGGACGACCAAAGAAAGGAGGTTGTGGAGGTAAGGGCACGTGGGGAGGATTGCTTGATACTGAAGACATGAACTTTCTTGACCCTCATGATCCAAACTATGACAGCACTGAGGAAAATGAACCATCAAACGAAAATAAAAAGAAGGGGGAGTTAGGTGAGTACAAGAAGAAAGCTACCATAATAGTGGAGGAATATTTCACCACTGATGATATTGTTGCCGTAAAAAATGAACTGAAAGAACTTGGAACACCATACTTTAGCTACTATTTTGTCAAAAAGCTTGTCTCAATGTCAATGGACAGACACGACAAAGAAAAAGAAATGGCTGCTGTTCTGCTATCTTCTCTTTATGCTGACACAATTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAACTAGTTGAATCTGCAGATGACCTGATTGTAGACATACCAGATGCAGTTGATGTTCTAGCGCTTTTCTTGGCTCGAGCTGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCTTACTTGCCAAAGGATTCAAAAGGGTTAGAAGTCTTGAAAAAGGCAGAGAAAAACTACCTTGCAGCTCCTCTGCATGCAGAGGTTATAGAGCGCCGGTGGGGCGGAAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGAATAAACAATTTGTTGATAGAATATGTAACAAGTGGTGATAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCATCATGAGATAGTGAAACGGGCTCTTATAATGGCAATGGAGAGGCGCCAAGCAGAAGGTCCCCTACTAGATCTCTTGAAAGAAGCAGCCGAAGAAGGTTTTATCAACTCCAGTCAAACCTCAAAGGGCTTTGATCGGTTGATTGACACTGTCGATGACTTATCACTCGACATACCAAATGCACGTGAAATACTCCAAAAGCTAATGTCCAAGGCAGCATCTGAGGGCTGGTTATGTGTTTCATCTCTAAAATCACTCTCACTGGAGCCAGAAAAGAAGTCACTAGAAGAAAGTGCAGCCAGAAGTTTCAAGGGAAAGGCTCAGTCCATAATTCAAGAGTACTTCTTGTCAGGTGATATATTTGAAGTCATTAGTTGTCTTGAGCAAGAAAACAACACTTGCTCTGCGCACCTCAATGCAATCTTTGTCAAGAGACTTATAACTTTAGCTATGGATCGGAAGAAGCGTGAGAAGGAAATGGCCTCAGTTCTGCTTTCATCTCTCTGTTTCCCGGCTGATGATGTAGTGAATGGTTTTGTCATGTTGATAGAATCAGCAGATGACACTGCTCTGGATAATCCAGTAGTGGTGGAGGATCTTGCCATGTTCCTGGCCAGAGCAGTGGTGGACGAAGTCCTGGCCCCACAACATTTAGAAGAGATTGGAACACAATGTCTTGGTCCAGATTCAATAGGAAATAAAGTGCTTCAAATGGCGAAGTCAGTGCTAAAGGCTAGGCTTTCTGGAGAGAGAATATTAAGGTGTTGGGGTGGAGGAGGAAGCAGCAGAAGTGGGTGGGAAATTGAGGATGTTAAGGACAAGATTATAAACCTTCTGGAGGAGTACGAGTCTGGAGGCGACATAAGGGAAGCGTGTCGCTGCATGAAAGAACTTGGAATGCCATTTTTCCACCATGAGGTGGTCAAGAAAGCTCTGGTGAAAATCATTGAGAAGAAGAATGACAGGTTGTGGGGTCTGCTCAAGGAATGCTTTGAATCTGGACTGATAACTATGAACCAGATGGCGAAGGGCTTTGGAAGGCTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCTAAGAAACAGTTTACACACTACGTCGAACGAGCAAAGAGCTCAGAATGGTTGGATTCTTCATTTAGTCTCAGCAAATTTGAACATTCAACGGAGAATGGAACCTGCTAA 2301 0.4342 MDVMDISNGSTAKEHRKPHESVSKGADSLSVSPLQTSPKSPRPCGSPRSPRFQVKGGKQSSNHEKHPQSPRDGCPKKDSFPVSSLKISPKSPTSPTSPKSPRLPGHSPKNERQSRSPRDGRPKKGGCGGKGTWGGLLDTEDMNFLDPHDPNYDSTEENEPSNENKKKGELGEYKKKATIIVEEYFTTDDIVAVKNELKELGTPYFSYYFVKKLVSMSMDRHDKEKEMAAVLLSSLYADTIDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLPKDSKGLEVLKKAEKNYLAAPLHAEVIERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGPLLDLLKEAAEEGFINSSQTSKGFDRLIDTVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSLEPEKKSLEESAARSFKGKAQSIIQEYFLSGDIFEVISCLEQENNTCSAHLNAIFVKRLITLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPDSIGNKVLQMAKSVLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIINLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITMNQMAKGFGRLAESLDDLALDVPDAKKQFTHYVERAKSSEWLDSSFSLSKFEHSTENGTC 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4748g00032 766 SUPERFAMILY ARM repeat 469 630 IPR016024 -
Pral4748g00032 766 SUPERFAMILY ARM repeat 635 753 IPR016024 -
Pral4748g00032 766 Gene3D - 323 455 - -
Pral4748g00032 766 Gene3D - 623 755 - -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 9 23 - -
Pral4748g00032 766 FunFam programmed cell death protein 4 460 616 - -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 142 169 - -
Pral4748g00032 766 SMART ma3_7 337 448 IPR003891 -
Pral4748g00032 766 SMART ma3_7 472 583 IPR003891 -
Pral4748g00032 766 SMART ma3_7 173 284 IPR003891 -
Pral4748g00032 766 SMART ma3_7 640 749 IPR003891 -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 1 169 - -
Pral4748g00032 766 SUPERFAMILY ARM repeat 172 331 IPR016024 -
Pral4748g00032 766 ProSiteProfiles MI domain profile. 336 457 IPR003891 -
Pral4748g00032 766 Pfam MA3 domain 472 582 IPR003891 -
Pral4748g00032 766 Pfam MA3 domain 338 447 IPR003891 -
Pral4748g00032 766 Pfam MA3 domain 641 749 IPR003891 -
Pral4748g00032 766 Pfam MA3 domain 174 284 IPR003891 -
Pral4748g00032 766 ProSiteProfiles MI domain profile. 471 592 IPR003891 -
Pral4748g00032 766 PANTHER PROGRAMMED CELL DEATH 4 83 752 IPR039778 GO:0045892
Pral4748g00032 766 ProSiteProfiles MI domain profile. 639 758 IPR003891 -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 105 125 - -
Pral4748g00032 766 SUPERFAMILY ARM repeat 332 453 IPR016024 -
Pral4748g00032 766 Gene3D - 161 312 - -
Pral4748g00032 766 Gene3D - 458 615 - -
Pral4748g00032 766 FunFam programmed cell death protein 4 162 315 - -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 58 73 - -
Pral4748g00032 766 ProSiteProfiles MI domain profile. 172 293 IPR003891 -
Pral4748g00032 766 MobiDBLite consensus disorder prediction 25 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4748g00032 Pral-Chr4748 129025 132513 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4748g00032 639 735 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 2.53e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4748g00032 - - pcin:129295573 1327.77