Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4748g00021 ATGCCCATAAAGTGTGAGTGTATACCAACAATCAGGACTCATTCCAGCTCCGCCATTCGCAACGCCTCTCTCTCACGCAAGACAGGAGCAGAGTTTTTGGGCACCTTCATATTGATGTTTGCAGCATCAGCAGGACCCATATTGAACCAGAAATACAACGGCGTTGAGGGCCTCATCGGAAACGCCGCCTGTTCCGGCTTAGCCGTCACAATCGTGGTCTTGTCCATTGGCCACATCTCCGGCGCTCACCTCAACCCCTCCGTCACCATCGCCTTCGCCGCCTTCCGCCACTTCCCTTGGGTCCACGTCCCCGCCTACATCCTCGCTCAGGTCGTCGCCTCTATCTGCGCCTCCTTCACCGTCAAGGGCATCTTCCATCCGCTGGTGAACGGAGAAGTCACCATCCCTTCTGTGAGTACGAGTCTTGGACAGGCTTTTGTGCTGGAGTCCATCATCACTTTCAATCTTATGTTCGTTATCACGGCCGTCGCCACTGATACTCGCGCTGTTGGAGAAATGGCTGGGATTGCTATTGGAACCACAGTTCTGCTCAACATTCTCATTTCTGGGCCGGCAAGTGGGGGATCAATGAACCCGGTGAGGACATTGGGGGCGGCGGTGGCGGCGGGAAATTACAAGGACTTATGGCTATACTTCATTGCACCCACCGTCGGAGCTCTGGCCGGCGCCGGTGCTTATACTATGATCAAGCTCCGGGACGAAGACCCCAACCCACAACATCAGATGGGGGCAGCGGAACATGTTTTTGCTTCTACAAGTCCAAGTCTTCCCAAAAGGGCTTGTTTGGATAATGCGGTTGGACAAAAGGCCATATACAGGCTACATTTTTTGCGTGACATTAGGAGAGCCGACCGGGTTCCATATTTGGAGAGAATCATGATTCATTCTAGCGATGGATTGGAGGTGAAAGGTCTCAAATGCCCTTATCCATCACCATTATTCCTTCCCAGTCTTCCACCACCCTCACATCCGGTCACTATCATAGCCCAGGCAGCTGTGTCTATCAGCTCTGTTGCTGTTTCTGCCTATAAATTTCAACAAGGAGCAGTTGAAGACAGCTTCTCAAACGCTAGAGGGAAAAGTATGGAGAACAGCATAGGAAGGTACTCTTCTCTGAATTGGGACCTGATATGGGGAGTTGCCATTTGGAAGTTGTGGACTTGGCGCAATTATTCCATCTTCAAGACTGATTTTGTGAAACCAACAAATCCTGACTTGATTATCAAGCACTCTTGGAAACTGTATGCACAAACTAATGAAGAACCTTTTGCAAAGGGTAGACCACAGAGCACCATTTTAGCTAGGTGGGCACCCCCTCCATCAGGGTGGATTAAAGTCAATGTAGATGGCGCTATGGTATCAACTTCGACTAGAGCAAGCTGCGGGGAGTCATCAGAGACCATAATGGATGTTGGATAG 1440 0.5056 MPIKCECIPTIRTHSSSAIRNASLSRKTGAEFLGTFILMFAASAGPILNQKYNGVEGLIGNAACSGLAVTIVVLSIGHISGAHLNPSVTIAFAAFRHFPWVHVPAYILAQVVASICASFTVKGIFHPLVNGEVTIPSVSTSLGQAFVLESIITFNLMFVITAVATDTRAVGEMAGIAIGTTVLLNILISGPASGGSMNPVRTLGAAVAAGNYKDLWLYFIAPTVGALAGAGAYTMIKLRDEDPNPQHQMGAAEHVFASTSPSLPKRACLDNAVGQKAIYRLHFLRDIRRADRVPYLERIMIHSSDGLEVKGLKCPYPSPLFLPSLPPPSHPVTIIAQAAVSISSVAVSAYKFQQGAVEDSFSNARGKSMENSIGRYSSLNWDLIWGVAIWKLWTWRNYSIFKTDFVKPTNPDLIIKHSWKLYAQTNEEPFAKGRPQSTILARWAPPPSGWIKVNVDGAMVSTSTRASCGESSETIMDVG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4748g00021 479 Gene3D Glycerol uptake facilitator protein. 6 249 IPR023271 -
Pral4748g00021 479 SUPERFAMILY Aquaporin-like 22 246 IPR023271 -
Pral4748g00021 479 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pral4748g00021 479 PANTHER AQUAPORIN NIP2-1 17 241 IPR034294 -
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 Pfam Major intrinsic protein 20 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4748g00021 479 CDD MIP 26 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4748g00021 Pral-Chr4748 82240 87464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4748g00021 4 245 Major Intrinsic Protein MIP AT4G10380 66.400 5.26e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4748g00021 K09874 - gmx:100775229 352.058