Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00166 ATGGACCCCAACTTCGTCGGAAAGCCGCCGATGACGGTGGACCTCGAGCAGATGCCTGACACCCCACAGCGAGGGTCCCACCACCGTAGGGCCCACTCCGACAACTCCTTCCGCATCGCCAACTTCGATGAGCTCCTCCTCTTCGACCCTTCCGACCTCGATATCTCCAACCTTCCTTCGCCGGCGTTGCCCAGCGCCACCGGCACCAACCCCTCGCCTTTCGCCGCCGCCGCTACTGCACCCAGCAGCGGCTTTCCTGCCGCCATGGATTTTGCCTCGAAGCCGTCGGAGGAATCTAACTGCAGGAATTCCCGGTCCAGGCCCGCGGGTTCCCCCGTCGGCCATATCCGGAGCTTGTCCATGGACTCCGATTTTTTCAACGGCCTGGGATTGACTGGTGGCGTTGATGGGGACAAACTTGGCGGGAAAGGTGTAGAGGAGAGAAGGGTGGGTCATCACAGGCACAGCAATTCCATGGATGGGTCATCATCGTTGTCTTTTGAGGCCGACTCTTCCATGGATATCGACGGTGTGAAGAAGGCCATGGCTCCCGATAAGCTCGCTGAACTTGCTCTCGTTGATCCCAAGAGAGCTAGGAGGATTCTTGCTAATAGGCAATCTGCTGCGCGATCAAAGGAGAGAAAAATTCGGTACACAAACGAGCTGGAAAGGAAGGTGCAGACGCTTCAAAATGAAGCAACAAACCTCTCTGCTCAGGTTACCATGCTTCAGAGAGACACTACAGGGTTGACTAATGAGAATAAGGAGCTTAAACTGCGCTTAGAGGCGATGGAACAACAAGCTCAGCTTAGAGATGCGCTCAATGAAGCATTAAAGGAAGAACTGCAACGCCTGAAGCTACAAAGTAGTCAAATAGCTGCCATGAATGGCAACCCTTCTTATGGCGGGTTTCTCTCTCAGTTTGCTTCTCAATTAGCCTTGCAACATCTTGCTAATCCTCAATCCCAGCAGACACAACAGCAATCACAGGTTGGCATGCCTCCGTCATCCGCCGATCACCCTTTCAACGGGCAGCCTGACCCGGACTTCTTGGACTTCAATGGCAAGAACTAG 1074 0.5428 MDPNFVGKPPMTVDLEQMPDTPQRGSHHRRAHSDNSFRIANFDELLLFDPSDLDISNLPSPALPSATGTNPSPFAAAATAPSSGFPAAMDFASKPSEESNCRNSRSRPAGSPVGHIRSLSMDSDFFNGLGLTGGVDGDKLGGKGVEERRVGHHRHSNSMDGSSSLSFEADSSMDIDGVKKAMAPDKLAELALVDPKRARRILANRQSAARSKERKIRYTNELERKVQTLQNEATNLSAQVTMLQRDTTGLTNENKELKLRLEAMEQQAQLRDALNEALKEELQRLKLQSSQIAAMNGNPSYGGFLSQFASQLALQHLANPQSQQTQQQSQVGMPPSSADHPFNGQPDPDFLDFNGKN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00166 357 Coils Coil 212 295 - -
Pral4746g00166 357 FunFam Transcription factor VIP1 195 248 - -
Pral4746g00166 357 MobiDBLite consensus disorder prediction 87 116 - -
Pral4746g00166 357 CDD bZIP_plant_RF2 197 246 IPR044759 GO:0003700|GO:0006355
Pral4746g00166 357 Gene3D - 195 248 - -
Pral4746g00166 357 Pfam Basic region leucine zipper 194 245 IPR004827 GO:0003700|GO:0006355
Pral4746g00166 357 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 329 - -
Pral4746g00166 357 MobiDBLite consensus disorder prediction 317 336 - -
Pral4746g00166 357 MobiDBLite consensus disorder prediction 1 33 - -
Pral4746g00166 357 SMART brlzneu 192 256 IPR004827 GO:0003700|GO:0006355
Pral4746g00166 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 257 IPR004827 GO:0003700|GO:0006355
Pral4746g00166 357 SUPERFAMILY Leucine zipper domain 196 251 IPR046347 GO:0003700|GO:0006355
Pral4746g00166 357 MobiDBLite consensus disorder prediction 317 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00166 Pral-Chr4746 1076929 1081135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00166 9 353 bZIP Transcription Factor Family AT1G43700 48.056 4.71e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4746g00166 bZIP_2 3.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00166 K20557 - qsa:O6P43_004198 404.06