Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00164 ATGGGTAGAAAGAAGCCGACCGCCCGTGATGATGATAACGCCCCCACTGTGTCCCAAGGCGGTGGAAAGTCGAAAAAGAAGGGGTTAGTGATCGATGATGATGAGTATTCTATTGGAACGGAGCTCTCTGAGGAACAGCCTTCTCAAGAAGAGAAGCCTGCGGCGATGGGAAAGAAGAAAGGTAAAAAAGGTAACTCGAAGGCTTCAAAAGCCGAGGACGAAGATTTAGAACAGGCGATGGATGATAATGATGATGATGTGCCTGAAGTTGTCTTTACTGGGAAAAAGAAGGGGAAGTCAAACAAGGGTGGTGGGAATAGTGTGTTTACTGCTTCGGGCTTTGGTTTGCTTGGTGATGTGGAGGGCGGAGAAGAAGATGATGATGATGATGAAGACAAACAATCCGGGTTAATTGGTGGGGTGGACAATGACGACGAGGACGACGAGGACGACGACCCAGTTGTTAGTTTTTCAGGTAAGAAGAAGTCCTCAAAGAGTTCCAAGAAGAAGGGTGGTAGCTTGTTCACTACATCAGCTTTTGATGCTATAGACGAAGATGATGAAGGGGAGGTGATCGATAATTCTATGGAAGCCAGCCGTGAAGAGAATGATGACATGGATGAACCAGTTATTAATTTTACGGGTAAGAAAAAATCATCAAAAAGTAGCAAGAAGGCTGGTGCCTTATTCACAGCGTCTAGTTTTGGTGATGGTGACGGAGAGCAGGGCAAAAATGACCAAGAGGATGAAGATGAAGAGATTGCTCCGATCACTTTCTCAGGGAAGAAAAAGAAGTCATCGAAGTCTTCCAAGAAGGCTGTTAATTCTTCATTTAGTGCAGCTTTTGCTGAAGGGGACGTGGATGATGATGATGATTCTGTGCTCGAGTCTACTAGAGCTGATGAAAGTAAGGCTGAGGACGAAGATGTTTCTATTCCTGTGTTTTCAGGTAAAAAGAAGTCTTCTAAGAAAAACAAGACCGCTATTACCAAAGCTAGTGATGATTTTGAATCTGTTAATGAAAGTCAAGATGCTGTAGAGCCTAAGCAGCCTAGCGTAATAGACAATAAAGGTAATAAGGATGAAGAGATGATTGACACATCGAAAAATAAAAAGAAGAAGAATAAAAAGAGTGGAAGAACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTTGCTGAGCTTGGGGAGGGGCCTCCAGTAAAACCTACTTCCCCTCCAGCAGCGGATGGTAAAGTTCAGGCTTCTTCTGAAGTAGCTGCTCCTGCTACTGCTGCTGTGGGAAAAGAAGGGGAAGATGCAATGGAGCCAGCTGCTGCAAAGAAGAAGAAGAAGAATAAAAAGAGCGGAAGGACTGCTCAAGAAGAGGAAGATTTGGACAAGCTTCTAGCCGAGCTAGGGGAGGGGCCTCCAGTAAAACCTGCATCCCCTCCAGCAGAGGATGACAAAGTTCAGGCTTCTTCTGAAGTAGCTGCTCCTGCTACTGCTGTGGTGGAAAAAGAAGGGGAAGAAGAGACAATGGAGTCAGCTGCTGCAAAAAAGAAGAAAAAGAAAAAGGAAAAAGAGAAGGAGAAGAAGGCTGCTGCGGCAGCAGCTGCTGCAAGTGCCCCTGATAATGAAAAGAATGAAGAAGTTAAACCTGAGACCTCAGAATCAAAGAAAAATGATTCCAAGACTAAAGCCGGTGACAAGAAAGTGCCAAAACATGTTAGGGAGATGCAAGAGGCACTGGCCCGAAGAAAAGAGGCTGAAGAGAGGAAGAAAAGGGAAGAGGAAGAGAGGCTAAGGAAAGAAGAGGAAGAGCGGCGGCGACAAGAGGAACTTGAGAAGCAAGCAGAAGAGGCAAGGCGTAGGAAAAAGGAAAGGGAGAAGGAGAAGCTACAGAAGAAAAAGCAAGAAGGCAAATTGCTAACCGGTAAACAAAAGGAAGAAGCTCGTCGTTTGGAGGCCATGAGGAAGCAGTTTCTTGCTGGTACAGGTGCTGTCACTCTTCCTACTGGGGACTCTGGTGCCCCAGCCAAACGACCCATATATCAGACAAAGAAGTCAAAACAAACCCATCATCAGCAGAATGGCTCTGCTCCTGTTAAGGCAGCTGAAGATGTGGAAGCAAAGGAAAACCTAGAGACCGCACCTGATGCAGAGTCATTGGAACCGGAGAAGGTTGAAGCGGCTGAGTCAGTGCAGGACGAGGATGAAGTTAAACCTTCTAAAGATGTTGAAGAGTTTGAAGTTGAAGAAGATGATGAGGATGAATGGGATGCAAAGAGTTGGGATGATGTTAATTTAAATGGAAAAGGTGCATTTGCTGATGAGGAGGCTGACTCTGAACCGGAACCTGTAGTGAAAAAGGAGATAAAAAATGCTGGACCCCCGGCTGCTGTCAAGTCAACAGGCACAACCAAGAAAGCTGCTTCCCAGGCTTCAACTGAGAAAATTGAAAGTAAAAAGCAGGTTGAGAAGCAACCAGCTAAGCTGGCTGTGCCTTCTCAGTCTAGTGGAGAGAACCTTCGCTCCCCAATTTGCTGTATTATGGGCCATGTGGACACGGGTAAAACTAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGTGGTATCACGCAACAGATTGGTGCCACATACTTTCCTGCTGAGAACATACGTGAAAGAACAAAGGAACTAAAAGCTGATGCAAAGCTGAAAGTTCCAGGTCTACTGGTGATAGATACTCCTGGGCATGAATCTTTTACTAACTTACGGTCAAGGGGTTCTGGCCTATGTGATATTGCAATTCTAGTTGTTGACATTATGCATGGATTAGAACCTCAGACAATAGAATCACTCAATCTATTGAAAATGAGGAATACAGAATTCATAGTTGCATTGAACAAAGTTGACAGACTTTATGGTTGGAAAGTATGCCGTAATTCTCCAATTGTTAAGGCAATGAAGCAGCAAACCAAGGATGTGCAAAATGAGTTCAATATGAGAGTCACTCAGATTATCACTCAATTCAAGGAACAGGGGTTAAACAGTGAGTTGTACTATAAAAACAAAGAAATGGGAGAAACTTTCAGCATTGTACCTACTAGTGCTATAAGTGGCGAAGGTATCCCAGATTTGTTGTTGTTGTTGGTTCAATGGACACAAAAGACAATGGCTCAGAAACTCACATATAGTGATGAAGTGCAGTGTACAGTTTTGGAGGTTAAGGTTGTTGAAGGTCATGGGACAACTATTGATGTCGTCTTGGTTAATGGTGTTCTCCATGAAGGGGATCAAATAGTTGTATGTGGAATGCAGGGGCCTATTGTTACTACAATTCGAGCTCTATTGACACCTCATCCTATGAAGGAGCTCCGTGTTAAGGGCACTTATCTCCATCATAAAGAAATTAAGGCTGCTATGGGTATCAAAATAACTGCCCAGGGGCTTGAACATGCTATTGCGGGCACTGCTTTATATGTGGTGAAGCCTGACGATGATTTAGAAAGTGTTAAAGAAGATGCCATGGATGATATGAAGACGGTCATGAGCAGGATTGACAAGAGTGGTGAGGGAGTTTGTGTGCAGGCGTCCACCCTCGGTTCTTTGGAAGCATTGCTGGAGTTTTTGAAAACACCAGAAGTCAATATTCCTGTTAGTGGCATAAGCATAGGCCCTGTACATAAAAAAGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTTTGCCACTATCCTGGCATTTGATGTCAAAGTCAATCAGGAGGCTAAAGATCTTGCGGAAGAACTAGGTGTGAAAATTTTTATGGCTGATATAATTTATCACCTATTTGACCAATTCAAGGCCTATATTGACAACATTAAGGAGGAAAAGAAGAAAGAAGCAGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCATACCAAATTTCGTTTTCAACAAGAAGGATCCAATCATATTGGGAGTTGATATTCTTGAAGGTGTTGTGAAGGTTGGGACTCCAATTTGTATTCCTTCCAGAGATTACATTGATATTGGTCGCATTGCATCCATTGAAAATAACCATAAAACTGTTGATTATGCCAAGAAAGGGCAGAAAATAGCCATTAAGATTGTTGGCGGCAATCCGGAGGAACAACAAAAGATGTACGGGAGGCACTTTGACGATGATGATGAGCTTGTAAGCCATATTTCGAGGAGATCCATCGATATTCTCAAAGCTAATTATCGGGATGAACTGAGTATGGAGGAATGGAAGCTGGTTGCGAAACTGAAAAATGTTTTCAAGATACAATGA 4290 0.4357 MGRKKPTARDDDNAPTVSQGGGKSKKKGLVIDDDEYSIGTELSEEQPSQEEKPAAMGKKKGKKGNSKASKAEDEDLEQAMDDNDDDVPEVVFTGKKKGKSNKGGGNSVFTASGFGLLGDVEGGEEDDDDDEDKQSGLIGGVDNDDEDDEDDDPVVSFSGKKKSSKSSKKKGGSLFTTSAFDAIDEDDEGEVIDNSMEASREENDDMDEPVINFTGKKKSSKSSKKAGALFTASSFGDGDGEQGKNDQEDEDEEIAPITFSGKKKKSSKSSKKAVNSSFSAAFAEGDVDDDDDSVLESTRADESKAEDEDVSIPVFSGKKKSSKKNKTAITKASDDFESVNESQDAVEPKQPSVIDNKGNKDEEMIDTSKNKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKPTSPPAADGKVQASSEVAAPATAAVGKEGEDAMEPAAAKKKKKNKKSGRTAQEEEDLDKLLAELGEGPPVKPASPPAEDDKVQASSEVAAPATAVVEKEGEEETMESAAAKKKKKKKEKEKEKKAAAAAAAASAPDNEKNEEVKPETSESKKNDSKTKAGDKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEERRRQEELEKQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLAGTGAVTLPTGDSGAPAKRPIYQTKKSKQTHHQQNGSAPVKAAEDVEAKENLETAPDAESLEPEKVEAAESVQDEDEVKPSKDVEEFEVEEDDEDEWDAKSWDDVNLNGKGAFADEEADSEPEPVVKKEIKNAGPPAAVKSTGTTKKAASQASTEKIESKKQVEKQPAKLAVPSQSSGENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKVCRNSPIVKAMKQQTKDVQNEFNMRVTQIITQFKEQGLNSELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMAQKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTALYVVKPDDDLESVKEDAMDDMKTVMSRIDKSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREFATILAFDVKVNQEAKDLAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKIIPNFVFNKKDPIILGVDILEGVVKVGTPICIPSRDYIDIGRIASIENNHKTVDYAKKGQKIAIKIVGGNPEEQQKMYGRHFDDDDELVSHISRRSIDILKANYRDELSMEEWKLVAKLKNVFKIQ 1429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00164 1429 FunFam Eukaryotic translation initiation factor 5B 1179 1285 - -
Pral4746g00164 1429 Gene3D - 1181 1285 IPR036925 -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 699 741 - -
Pral4746g00164 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 837 1128 IPR027417 -
Pral4746g00164 1429 Pfam Elongation factor Tu domain 4 1299 1391 IPR029459 -
Pral4746g00164 1429 CDD IF2_eIF5B 840 1050 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 297 314 - -
Pral4746g00164 1429 Pfam Elongation factor Tu GTP binding domain 841 1049 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 539 651 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 770 784 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 378 393 - -
Pral4746g00164 1429 Gene3D - 831 1059 IPR027417 -
Pral4746g00164 1429 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 531 1425 IPR015760 -
Pral4746g00164 1429 Coils Coil 500 532 - -
Pral4746g00164 1429 CDD aeIF5B_II 1061 1171 - -
Pral4746g00164 1429 FunFam Eukaryotic translation initiation factor 5B 831 1059 - -
Pral4746g00164 1429 FunFam eukaryotic translation initiation factor 5B 1060 1179 - -
Pral4746g00164 1429 FunFam Eukaryotic translation initiation factor 5B 1292 1429 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 498 515 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 354 370 - -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 1 835 - -
Pral4746g00164 1429 Pfam Elongation factor Tu domain 2 1076 1154 IPR004161 GO:0005525
Pral4746g00164 1429 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 837 1055 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 449 464 - -
Pral4746g00164 1429 NCBIfam small GTP-binding protein domain 842 966 IPR005225 GO:0005525
Pral4746g00164 1429 CDD IF2_aeIF5B_IV 1300 1395 - -
Pral4746g00164 1429 Pfam Translation-initiation factor 2 1166 1278 IPR023115 -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 742 756 - -
Pral4746g00164 1429 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1162 1291 IPR036925 -
Pral4746g00164 1429 MobiDBLite consensus disorder prediction 193 214 - -
Pral4746g00164 1429 Gene3D Translation factors 1292 1429 - -
Pral4746g00164 1429 PRINTS GTP-binding elongation factor signature 957 966 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 PRINTS GTP-binding elongation factor signature 841 854 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 PRINTS GTP-binding elongation factor signature 921 932 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 PRINTS GTP-binding elongation factor signature 905 915 IPR000795 GO:0003924|GO:0005525
Pral4746g00164 1429 SUPERFAMILY Translation proteins 1296 1428 IPR009000 -
Pral4746g00164 1429 Coils Coil 566 637 - -
Pral4746g00164 1429 Gene3D Translation factors 1060 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00164 Pral-Chr4746 1054920 1063619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00164 1 42 Eukaryotic Initiation Factors Gene Family AT1G76810 65.217 1.52e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00164 K03243 - gmx:100814875 1551.95