Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00160 ATGCAGCTGGGAGATCCAAGTGTGTTAGAGACCCCATCCGGCGAGCCCATGATGGCCACCGTGACGGCGGCTGCGGCGCCACCAGAAGCAACGGCCTCTGATGGTGGTGCAGAAGTCGAGATGATGGATAATATTGTCGGAATGGATGCAGCGAATTCAGGTGATGATATTGATCAGAAGAGAAGTGGCGGCGGTGGAGGAGGAGGAGGAGGAGGCAACCGGTGGCCTCGCCAAGAAACTTCTGCTCTATTGAAGATAAGGTCAGATATGGACGCTGCGTTTCGGGATTCCAGTCTTAAAGGTCCACTTTGGGAACAAGTTTCAAGGAAAATGGCAGAACTTGGATATAATCGAAGCGCAAAGAAGTGCAAGGAAAAGTTCGAGAACGTATACAAGTACCACAAGAGAACCAAAGAAAGCAGAAGTGGTAAACCAGAGGGCAAAACCTACAAATTCTTCGATCAATTACAAGCCCTTGAAAATAAATTCACTGTCTCTCACCACACTCCTCTAAAACCTCCTCCGCCACAACCGCAACCTTCTTTCCAAATGTGGCCTAGCAATATTAATAATGATCCTACCACAGCTATCTCTTACGTCACTGCTATTCCATCCACCGTAAACCCTACTGTTGTTCCTCCGCCACCGGCGCCGACGAATGTTGCTGCTGCCACCATCACCAACCCTAAGAATTTGTCAAACAAGAGCATTTTCTCTTCTGTCACGACCACCTCGACCTCATCGTCAACTGCTTCTGATGAGGACATGGAAGAGAAGTACAGAAAGAAGAGAAGGATGAAGGACTACTTCCGCAGGCTGACGAGGCAGGTGTTGGCAAAGCAGGAGGAGATGCAGAAGAGGTTTCTAGAAGCCATTGAGAAGAGAGAGCGTGAAAGAGAAGCACAGATAGAAGCTTGGAGAGCTCAAGAGATGGCCAGGATCAATAGAGAGCATGACATTCTAGTCCAGGAAAGATCCACCGCAGCCGCCAAGGACGCCGCCGTCATTGCTTTTCTCCAGAAGTTAGCCTGTGGCCAGCAAAATCCGGCACCGCCACCGCCTCCTCCTCCGGCTCCACCTCAACCTGTAATGCAAGCAGTAGAACCTCGAGAACAACTGCAATTGCTGCCTATTGACAACAAGTTTGAAATCCAGAAAACGAATATAAACAACGGCCATAATAGTCCGGTGAGTGTTTCTAATTCTTCTTCAAGGTGGCCAAAGGCGGAAGTTCACGCATTGATAAGGCTAAGGACGAGCATGGACCCAAGGTACCAAGAGAATGGACCGAAAGGACCATTATGGGAGGACATATCAGCTGGAATGCAGAGGCTAGGGTACAATAGGAGCGCCAAGAGATGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAAGTGAAGGAGAGTAACAAACAAAGGCGTGAGGATAGCAAAACTTGTCCTTATTTTCATGAGCTCGAGGCTCTTTACAGAGAGAAGAGCAAAAGCCACAACAGTATCGTCTTCGGTGCCGGCAATCCGAATCACGAAATGACCATGGAGCCGTTGATGGTGCAGCCGGAGCAGCAATGGAGGCCGCCTCCGCCACATGCGGAGGAGGAGGAAGGTGGTGGTGAGAGGGATAATATTGCGAATATGTTTCAGTACGAAGCGAAAGAAAGAGCGGGAGAAGAGGAGGAGGAGATGGAAGAAGACGATGATGTTGTGGAGGATGAAGTTATGGAAGATGATCATCAAGAAGAAGGACGTTATGAGGTTGCAGCGACAAATAATAAACTTCCTTCAGTGGACAGTGTTGAATGA 1809 0.4881 MQLGDPSVLETPSGEPMMATVTAAAAPPEATASDGGAEVEMMDNIVGMDAANSGDDIDQKRSGGGGGGGGGGNRWPRQETSALLKIRSDMDAAFRDSSLKGPLWEQVSRKMAELGYNRSAKKCKEKFENVYKYHKRTKESRSGKPEGKTYKFFDQLQALENKFTVSHHTPLKPPPPQPQPSFQMWPSNINNDPTTAISYVTAIPSTVNPTVVPPPPAPTNVAAATITNPKNLSNKSIFSSVTTTSTSSSTASDEDMEEKYRKKRRMKDYFRRLTRQVLAKQEEMQKRFLEAIEKREREREAQIEAWRAQEMARINREHDILVQERSTAAAKDAAVIAFLQKLACGQQNPAPPPPPPPAPPQPVMQAVEPREQLQLLPIDNKFEIQKTNINNGHNSPVSVSNSSSRWPKAEVHALIRLRTSMDPRYQENGPKGPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQRREDSKTCPYFHELEALYREKSKSHNSIVFGAGNPNHEMTMEPLMVQPEQQWRPPPPHAEEEEGGGERDNIANMFQYEAKERAGEEEEEMEEDDDVVEDEVMEDDHQEEGRYEVAATNNKLPSVDSVE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00160 602 MobiDBLite consensus disorder prediction 47 79 - -
Pral4746g00160 602 CDD GT1 405 469 - -
Pral4746g00160 602 Gene3D - 75 136 - -
Pral4746g00160 602 Gene3D - 406 467 - -
Pral4746g00160 602 Pfam Myb/SANT-like DNA-binding domain 404 491 IPR044822 -
Pral4746g00160 602 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Pral4746g00160 602 ProSiteProfiles Myb-like domain profile. 398 462 IPR001005 -
Pral4746g00160 602 SMART sant 71 133 IPR001005 -
Pral4746g00160 602 SMART sant 402 464 IPR001005 -
Pral4746g00160 602 CDD GT1 73 138 - -
Pral4746g00160 602 Coils Coil 278 309 - -
Pral4746g00160 602 FunFam Trihelix transcription factor GT-2 75 136 - -
Pral4746g00160 602 PANTHER FI21293P1 34 536 - -
Pral4746g00160 602 MobiDBLite consensus disorder prediction 522 602 - -
Pral4746g00160 602 ProSiteProfiles Myb-like domain profile. 73 131 IPR001005 -
Pral4746g00160 602 MobiDBLite consensus disorder prediction 558 580 - -
Pral4746g00160 602 MobiDBLite consensus disorder prediction 1 35 - -
Pral4746g00160 602 FunFam Trihelix transcription factor GT-2 406 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00160 Pral-Chr4746 1002998 1005942 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00160 69 526 Trihelix Transcription Factor Family AT1G76880 52.675 4.54e-148 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral4746g00160 Myb_DNA-bind_4 4.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00160 - - pcin:129293735 782.711