Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00103 ATGCTCCCCACGATGAATCTCACTGGAGACGTGATTCTCGCCGAGCATGTGTCTCCTCGACTGGGGAAGCTTGGGCCTGGAGATTTGGTGCTCATTCGCTCTCCCTTAAACCCCAATCGGACTTTGACCAAGCGCATTGTGGGCTTGGAAGGGGATAGGATCACTTACTTCGATCCCAGGCATGGTGATTTGCCTCTAAATGCTGTGGTGCCAGTGGGGCATGTTTGGATTCAGGGGGATAACATCTATGCCTCCCGTGATTCACGGCATTTTGGTCCTATTCCATATGGTCTTATAGAAGGAAGAGTGTTTTTTAGGGGGCATGAATCTTACGCTAATCATTTTTTTCAATACTTCTATGGTGTTATCAGGTTTGGCCACCTCATAGTTTTGGACCGCTGGATTATTAAATGTGTTGAAGATAATAAGGAATTGTTAGTAGCTAAACTCTTGCTCTGCAATATTCTAACAGAGCTTGGGTGTTGA 486 0.4588 MLPTMNLTGDVILAEHVSPRLGKLGPGDLVLIRSPLNPNRTLTKRIVGLEGDRITYFDPRHGDLPLNAVVPVGHVWIQGDNIYASRDSRHFGPIPYGLIEGRVFFRGHESYANHFFQYFYGVIRFGHLIVLDRWIIKCVEDNKELLVAKLLLCNILTELGC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00103 161 Gene3D Umud Fragment, subunit A 1 119 - -
Pral4746g00103 161 Pfam Signal peptidase, peptidase S26 3 57 IPR019533 GO:0004252|GO:0006465
Pral4746g00103 161 Pfam Signal peptidase, peptidase S26 69 105 IPR019533 GO:0004252|GO:0006465
Pral4746g00103 161 SUPERFAMILY LexA/Signal peptidase 1 107 IPR036286 -
Pral4746g00103 161 CDD S26_SPase_I 1 103 IPR019533 GO:0004252|GO:0006465
Pral4746g00103 161 PRINTS Bacterial leader peptidase 1 (S26A) family signature 42 54 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4746g00103 161 PRINTS Bacterial leader peptidase 1 (S26A) family signature 70 89 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4746g00103 161 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00103 Pral-Chr4746 591183 595666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00103 1 106 MADS-box Gene Family AT1G29960 53.271 2.83e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00103 K09647 - cave:132173278 172.94