Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00100 ATGAGCAAGTCTCTGGTTTTAGGCTTTTACATCACCATATGCTGCATCTCTTTTGTCATTTCCAAAATCATCATCTCAGTTCTCCTCTACAGAAGATGGAAAAGAAAGCACATGATTTATGAAGAAGCTTATCCAGGTGGAAGGATGGTGATATTTAGGTGTTCAGTGCTTCAATCAATGACGTCTGATATGGTTTTAAAGAAGACACTGAAACTGAGCAACGAGGACATTATTGGATCTGGTGGGTATGGGACAGTTTATAAACTGCAAATAGATGACACCAAAGCCTTTGCAGTGAAAAGGCTCAGCAAAGGAACTGCAGATAGAGAGAGAGGCTTTGAGAGAGAGCTGGAAGCAATGGCAGATATAAAACACCGCAATATTGTGACTCTTCATGGTTACTATACTGCCCCTCATTACAACCTTCTCATATATGAGCTCATGTCTAATGGAAGCTTAGATTCCTTTCTACATGGACGATCAAAGAACAAGTTGTTTTTGGATTGGCCAACAAGGTACAGAATAGCCCTAGGTGCTGCTAGGGGAATATCATATCTTCACCATGATTGTATCCCTCACATTATCCACAGAGATATCAAATCAAGTAATATATTGCTGGATCACAACATGGAGGCTCGAGTTTCTGATTTCGGGTTGGCCACCTTAATGGAACCCAACAAAACTCATGTTACAACCGTTGTGGCCGGAACTTTTGGATACTTAGCGCCTGAATACTTTGATACGGGAAGAGCAACTGTAAAAGGGGATGTCTACAGCTTTGGAGTTGTGTTATTGGAGCTTTTAACTGGGAAAAGACCCAATGATGAAGCATTCATAGAGGAAGGAAGCAAGCTTGTCACATGGGTGAAGGCTGTAGTTCAAGAGCGGAAGAAGGAGCTAGTTCTCGACAACACCTTGGGATCCTGTCCCATCCAAGAGGTTGACAATGTGTTCAACGTTGCAATGATGTGTCTTGAACCAGATCCTCTCAAGAGGCCAACCATGGCTGAGGTTGTCACCTTCCTGGAGCAAACAAACCCCACACAAACTTGA 1053 0.4274 MSKSLVLGFYITICCISFVISKIIISVLLYRRWKRKHMIYEEAYPGGRMVIFRCSVLQSMTSDMVLKKTLKLSNEDIIGSGGYGTVYKLQIDDTKAFAVKRLSKGTADRERGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMSNGSLDSFLHGRSKNKLFLDWPTRYRIALGAARGISYLHHDCIPHIIHRDIKSSNILLDHNMEARVSDFGLATLMEPNKTHVTTVVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKRPNDEAFIEEGSKLVTWVKAVVQERKKELVLDNTLGSCPIQEVDNVFNVAMMCLEPDPLKRPTMAEVVTFLEQTNPTQT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00100 350 SUPERFAMILY Protein kinase-like (PK-like) 57 344 IPR011009 -
Pral4746g00100 350 Gene3D Transferase(Phosphotransferase) domain 1 148 349 - -
Pral4746g00100 350 ProSiteProfiles Protein kinase domain profile. 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00100 350 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00100 350 Gene3D Phosphorylase Kinase; domain 1 48 147 - -
Pral4746g00100 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pral4746g00100 350 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00100 350 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pral4746g00100 350 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Pral4746g00100 350 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 345 - -
Pral4746g00100 350 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00100 Pral-Chr4746 573687 576576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00100 3 344 Receptor kinase-like Gene Family AT2G35620 45.507 2.58e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Pral4746g00100 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00100 - - qsa:O6P43_001114 572.007