Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00098 ATGGGTCCTGATACAATAATGGGAAGTGGAGACTACCCTCTGCTGAAGGATTTGAGATTGGAAATTGAAGGAAAGGAGGGAACTTTCTCGGTCTGTTTCTGGGTTTATCTTATGAGCTCCACCACATTCCCTGCTACGATTCTCCAACAGGTGCGCTCTGATATCTCCAAAAGTGCCCCTTTTCTTGTTATAAATGACAATAAGAGAATCAACCTTTTACCTGTTATTCTCTTACACGAAGAAGCTCCTAATGTTGGCGATGTCAATTCATGGGCAGAAGTTCCGCATGCAACTGTAGATTTTGAGTTCCCTTTAGAAAAATGGATCCATGTTGGATGTGAGATTACCCCAGACCATATTCAGCTTCAGATTAATGGAGAGATTGTTGGAGCAAAATCTCTGTCTTCCTTATTAAATAAGGAATCCAATTCAATTGGTTTGACTAAAATTGCTTTGGCTTATGTCGGTGGTGATGGCAATATTGTTCAGGGTTATGTGCACAACTTGGAAGTCTTGCCCTCTGCTTCCTCTATTAAGGATCAACATTTAAAGGACCCTCCTCTGAAGTTATCTATTGATGAATTGTCTGCCTCTGAGATTGAAGAGGAAAGTGATGGAGTCTGGAGCATTGTTGGTGGCAAGGCATCGTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTGTCAGATGCTTTTGGCCAGCCTGTAGACAAGGATAGTGAGGTGTTTGCTTCACTTTTGTATGCTGATACTGGAGCACCTGTGGAGAACACAACTGATGCTGAAGCACCTCTTTTGCTTAGCTCTGATGGGACCGAATATTCTGCTCATGAAAGACCAAGTAAACTCTTGCAGGGACGTGCCTCATTTAAGCTCAAGATATCTCAGCTTTCATCCAAGTGTGATAATAGGCTGTTCCTCATCCGGTTTTGTCTTCCGAAGTTGGGAAGTTATCCTTTTCTTGAGACATCCTCTCGTCCAATTCGATGTATTTCCAGAAGTCGCAACACAAGATTGTCGACTTTGGTGTGGAAAAGATCGACTCCTCCTGATGCTTCATTGGAACTTCAAAATGCTGCTGCTCATGAAGCAAAAGCCAGTAGTCCATCGATGAAGCGGTTTAGACTTGGGCATGACAAAATATCTGTATCAGTGAAGGCTGACGGTGCCTCAGAGCAGCCTGATGAGGAATGCAATTCTCATGCCAGGACCATAAATCGGATTGAGAATGGGTTTGCAACAAGCTTGGAAGGTAGACCTGAGAACTTTGATGAAGCAGATAACTCTCCATCTGATTCAGGGAGCATAGGGGAGGGAAATTCACAGTCCAAGATCGCAAGAAATCCAATCTCTGACATGACCATATTCAAATACTGCCTGGCAGGCTTAACTGAGAGGTCTCTTATGCTCAAGGAAATAGCTTCCTCTGCCTCTGACAAAGAAATTTTGGAATTTGCATCCCAGGTGTCACGCTATTCAGGATGTTCACATTATGGAACCCAAATATCATTTTCCAAGGGATTAATAGAGCAAGGAACTCTGGTATGGAAGACATTGTCCCAAAACAACTACAATATACGGTGGGACAGTGCAGTTTATGAGATTGAAGAGCACTTCATGAAGATTGCTCGCTGCAGTTCAAGAGCTCTCACACTCCAGGACCTAGAGGTTCTGAGAAGAATTTCTGGATGTCAGGAGCATCTAGCCCAAGAGAACTTTGAGAAGATGTGGTGCTGGTTATACCCAGTGGCTTTTACAATTTCAAGGGATTGGATACTCCCACTCTGGAAATCCACATCACCCAAGTGGATTGAAGGATTCATAACTAAGGAAGAAGCAGAAGCTTCCCTTCAAGGACCGAGGGGGCTTCAGGAACCTGGGACATTTATACTTCGATTTCCCACCTCAAGAAGTTGGCCCCATCCGGATGCTGGTAGTTTAATTGTGACATATGTTGGAAAAGACTACAAACTTCACCATAGGCTACTTTCGATTGATCATATTTATGGCTCTGGAGACGACAGAACTGGCTTGACACCACTGCAAGATATGCTCTTGGCAGAACCTGAGCTACGTAGATTAGGAAGGATAATAAGAAGTCACTAA 2103 0.4356 MGPDTIMGSGDYPLLKDLRLEIEGKEGTFSVCFWVYLMSSTTFPATILQQVRSDISKSAPFLVINDNKRINLLPVILLHEEAPNVGDVNSWAEVPHATVDFEFPLEKWIHVGCEITPDHIQLQINGEIVGAKSLSSLLNKESNSIGLTKIALAYVGGDGNIVQGYVHNLEVLPSASSIKDQHLKDPPLKLSIDELSASEIEEESDGVWSIVGGKASCRRNFSLDVVLSDAFGQPVDKDSEVFASLLYADTGAPVENTTDAEAPLLLSSDGTEYSAHERPSKLLQGRASFKLKISQLSSKCDNRLFLIRFCLPKLGSYPFLETSSRPIRCISRSRNTRLSTLVWKRSTPPDASLELQNAAAHEAKASSPSMKRFRLGHDKISVSVKADGASEQPDEECNSHARTINRIENGFATSLEGRPENFDEADNSPSDSGSIGEGNSQSKIARNPISDMTIFKYCLAGLTERSLMLKEIASSASDKEILEFASQVSRYSGCSHYGTQISFSKGLIEQGTLVWKTLSQNNYNIRWDSAVYEIEEHFMKIARCSSRALTLQDLEVLRRISGCQEHLAQENFEKMWCWLYPVAFTISRDWILPLWKSTSPKWIEGFITKEEAEASLQGPRGLQEPGTFILRFPTSRSWPHPDAGSLIVTYVGKDYKLHHRLLSIDHIYGSGDDRTGLTPLQDMLLAEPELRRLGRIIRSH 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00098 700 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 30 691 IPR001217 GO:0003700|GO:0006355|GO:0007165
Pral4746g00098 700 ProSiteProfiles Src homology 2 (SH2) domain profile. 602 700 IPR000980 -
Pral4746g00098 700 Gene3D SH2 domain 588 693 IPR036860 -
Pral4746g00098 700 MobiDBLite consensus disorder prediction 426 443 - -
Pral4746g00098 700 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 171 IPR013320 -
Pral4746g00098 700 SUPERFAMILY SH2 domain 597 685 IPR036860 -
Pral4746g00098 700 MobiDBLite consensus disorder prediction 415 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00098 Pral-Chr4746 560994 568977 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Pral4746g00098 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00098 - - gmx:100803169 1053.51