Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00080 ATGCCTGGGAATAAGTATAACGGTAATCCAAATCATTTTCCAGGTCGTGTTGAACGACTTGTCCGAGAAAGAGAACTAAGAAAAATCACCAGGGCTTCTCATTTCAATGAGTCAGCTGATAATAATAATAGGGTTACTAAACCGTTTGAGCATAACCTGCGTTTAAGAGAAGATAATAACTCAGGAACTTCTAATGCGCAATACCTGGAGGCAACTGCAAGGGGTCTTTATCAGGGACGTGAAAGCCAAGATGGGAGGCCTTATAGACTTTTGGTGGTGGCCAACAGGCTGCCAGTCTCAGCAGTTAGGAGAGGCGAAGATTCATGGTCTCTGGAGATTAGTGCTGGAGGTCTAGTTACCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGGTGGGCTGGTGTCAACGTGCCAGACGAGATTGGACAGAAGGCACTTACTAAAGCTTTGGCTGAAAAGAGGTGCATTCCAGTGTTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTACCCCAAGAAGATCGCCTTGCTACTACACGGAGCTTCCAGTCTCAGTTTGCAGCATACAAGAAAGCAAACCAAATGTTTGCTGATGTCGTGAACGAGCACTACGAAGAGGGTGATGTTGTTTGGTGCCATGACTACCATCTCATGTTTCTTCCAAAATGTTTAAAGGAATATAACAATAAAATGAAAGTTGGCTGGTTTCTTCACACGCCATTTCCATCTTCTGAAATTCATAGGACATTACCATCACGTTCAGAGCTCCTTCATTCTGTTCTTGCTGCTGATTTAGTAGGATTTCACACCTATGATTATGCCCGCCATTTTGTTAGTGCCTGTACTCGCATTCTTGGACTTGAGGGCACTCCTGAAGGGGTTGAGGACCAGGGGAGATTGACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCTGATCGATTCAGACGTGCCCTTGAGCTTACTGAAGTGAAGAATGATATCAAAGAATTGGAAGAAAGATTTGAGGGTAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGGATTCCCCAGAAAATTCTAGCATTTGAAAAGTTTTTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATTAATGGAAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGTTCGCTTGATTTTTATAAACTGTGTGCTTTATATGCTGTTACTGACGTAGCACTGGTCACATCTTTGAGGGATGGGATGAATCTTGTCAGTTATGAATTTGTGGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGCGCTGCACAGTCTCTAGGTGCAGGAGCAATTCTGGTTAACCCCTGGAACATCACAGAAGTTGCAGCCGCCATTGCCGAGGCACTAAATATGTCATCTGGGGAAAGAGAGAAACGTCATAAGCACAATTATGTACATGTGACAACCCACACTGCTCAAGAATGGGCGGAGACTTTCGTAAGTGAACTAAATGATACTGTGGTCGAGGCGCAACTAAGGACAAGACAAGTTCCACCCCAACTTCCAACCAAGACTACAATTGAACGTTATCTGCAGTCAACTAATCGATTGCTTATATTGGGATTCAATGCAACTTTAACCGAACCAGTCGAAAAGAAAGGCGATCAGATTAAGGAAATGGAGTTGAAGGTGCATCCAGAATTAAAACAATCGTTGACAGCACTTTGTAATGACCCGAATACCACAATTGTTGTGCTTAGCGGAAGTGGTCGAAATGTCCTATATAATAACTTTAAGGAATATAACATATGGCTAGCAGCAGAGAACGGGATGTTTTTACGCCCTGCAAAGGGAGAATGGATGACAACGATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAATACTTCACAGAAAGAACCCCCCGGTCTCATTTTGATTTGGAAGAAAGAGAGACCTCGCTTGTATGGAACTACAAATATGCAGATGTTGAGTTTGGAAGACTTCAGGCAAGGGACATGTTGCAGCATCTCTGGACTGGTCCAATTTCCAATGCATCAGTTGATGTTGTTCAAGGTAGCCGATCAGTTGAAGTGCGAGCTGTTGGCGTTACGAAGGGAGCAGCAATTGACCGCATCTTGGGTGAGATAGTTCACAGTAAATCCATGACAGCACCAATCGATTATGTTCTATGTATAGGACATTTTCTATCAAAGGATGAAGATGTTTATTCCTTCTTCGAGCCGGAGCTTCCTTCCGGTGGCGTGGGTGGTCCACGAAACAAGGTGCCGGAAGTAGCCAAGTCTCCTGCTGAGAGACGACAATCTCTGAAGATCACAAGCAGTACTAAAGCTGGAACAAAATCATCTCCAAATAAGACACAAAGGCCTGTGTCAAATTCTGACAAGAAAAACACAAACCATATTTGCAGTGCACCAAGGAGGCTGGCACCTGAGAAGATCTCATGGAATGTGCTTGACCTCAAGAAGGAGAATTACTTCTCTTGTGCCGTTGGCCGAACCCGAACAAATGCTCGGTATACGCTTGGATCCTCAGATGATGTGGTTTCACTCCTCAAGGAACTGGCTCAAGCATCTTCTCCAAACTATTTATCGACTAATTAA 2793 0.4343 MPGNKYNGNPNHFPGRVERLVRERELRKITRASHFNESADNNNRVTKPFEHNLRLREDNNSGTSNAQYLEATARGLYQGRESQDGRPYRLLVVANRLPVSAVRRGEDSWSLEISAGGLVTALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYNNKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFRRALELTEVKNDIKELEERFEGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFYKLCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAEALNMSSGEREKRHKHNYVHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPTKTTIERYLQSTNRLLILGFNATLTEPVEKKGDQIKEMELKVHPELKQSLTALCNDPNTTIVVLSGSGRNVLYNNFKEYNIWLAAENGMFLRPAKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDLEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTAPIDYVLCIGHFLSKDEDVYSFFEPELPSGGVGGPRNKVPEVAKSPAERRQSLKITSSTKAGTKSSPNKTQRPVSNSDKKNTNHICSAPRRLAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVSLLKELAQASSPNYLSTN 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00080 930 Gene3D Glycogen Phosphorylase B; 77 329 - -
Pral4746g00080 930 Gene3D - 610 772 IPR023214 -
Pral4746g00080 930 Pfam Glycosyltransferase family 20 89 554 IPR001830 GO:0003824|GO:0005992
Pral4746g00080 930 SUPERFAMILY HAD-like 586 919 IPR036412 -
Pral4746g00080 930 CDD HAD_TPP 587 806 - -
Pral4746g00080 930 Gene3D - 676 758 - -
Pral4746g00080 930 MobiDBLite consensus disorder prediction 811 867 - -
Pral4746g00080 930 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 81 335 - -
Pral4746g00080 930 Pfam Trehalose-phosphatase 609 818 IPR003337 GO:0003824|GO:0005992
Pral4746g00080 930 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 89 557 - -
Pral4746g00080 930 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 89 554 IPR012766 GO:0003825|GO:0005992
Pral4746g00080 930 Gene3D Glycogen Phosphorylase B; 331 538 - -
Pral4746g00080 930 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 676 758 - -
Pral4746g00080 930 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 920 IPR001830 GO:0003824|GO:0005992
Pral4746g00080 930 CDD GT20_TPS 89 554 IPR001830 GO:0003824|GO:0005992
Pral4746g00080 930 MobiDBLite consensus disorder prediction 830 863 - -
Pral4746g00080 930 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 336 538 - -
Pral4746g00080 930 FunFam Alpha,alpha-trehalose-phosphate synthase 610 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00080 Pral-Chr4746 469380 487246 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00080 1 923 Trehalose Biosynthesis Gene Families AT1G78580 76.739 0.0 1474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00080 K16055 - qsa:O6P43_029237 1578.53