Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00063 ATGAACCTCATTCTGCTGCCATTTTTCTTCGCAAGGATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGACATAGGGAGGACGCTGGGGAAGAAGGACTGGAACTTCAGCGGCGATCCATGCAGCAGAGGACTCAGTGGATGGAACGTCGACTGTTCGGTGGGAAATACCGGCGGCCACATCATTAGCATGGACCTTACACGCAATTACCTCAGCGGCATAATCCCTCCAGAATGGGGCTCTATGAAACTTGTTAAAATCATCCTCCTCGCCAACCGTTTAACGGGTTCAATCCCAGCAGAGCTGGCAAACATTTCCACTCTCGAGATTTTAAACATTGGTTTCAATCAATTTTCGGGAAATCTTCCTACTGAGCTTGGGAAACTACCTCGGCTTCAAAGACTGCATCTTGCTTCAAACAATTTTACTGGGCAAATACCTGCAACATTCGCTGGGCTAACCAACTTGACTCACTTTCGAATCAGTGACAACAAATTCTCCGGAAAGATACCCGATTTCATTGGGAACTGGAAGACTCTCCGCATGCTAGCAATTGTGGCGAGTGGCTTGAGCGGGCCTATTCCTGCTGGACTTTCTCTTTTAGTAAACTTAGTTGATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAATTTTCCACAACTTGATAATATGACAAAGTTGGAAACAATCATATTGAGGAGCTGCAACATTGTTGGATCTCTTCGACTTGACTTTACCGAGAGCATGTCTTATTTGCTTGTGTTGGACCTCAGCTTTAACAAATTGAGTGGAGAAATGCCATCCAGCTTCACACGTCAATCACAAGTGAAATTCTTATATTTGTCAGGAAACATGCTAAGTGGACCAGTGCCTGATTGGTCAATAAGAAGTGAAAACAATGTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTTGAAGCCTTCACTTTGTACACAACAGAATGTGAATTTATTCGCAAATCCTTTGGGAGGAAACAAGTCCGGACTCATCCCATGCTCCAGAGTGTGTCCTAAAGCTTACTATTCGTTCCGCATAAATTGTGGTGGAAAGGAAGTATATGTTGGAGGGAAAAAATACGACGAAGACCTTATCGAGGGACAGGCATCTCAATTGTTCGTGAGTGAAAGATCAAACTGGGCATTCAGTAACACTGGTCACTTCATTGATGATGATCAACGTCTCTCAAAATCTTACATTGCGGATAATGATAATAATAATTCAGGACTACTCTTTATGCCGAATTCTGAACTTTACACAAATGCACGCCTCTCCCCCATTTCTCTGACTTACTATGGTTTTTGTCTGGAGAATGGTAACTACACAGTAAACCTTCATTTTGCTGAGATAATGTTTACTGCTGATAAAAGCTTCAGGCGCTTGGGAAGACGAGTATTTGATGTTTACATTCAGGGAAAATTGGTGCAGAAGGATTTCAATATTGCAGATGCAGCAGGAGCTGGTAAGGCGATCACAAGAAATCACACTGTTGTAGTTAACAAGAACGATTTGGAGATTCGCTTATATTGGGCTGGGAAAGGGACAGCCAGTGTTCCTGATAGAGCGGTATATGGCCCTCTCATATCAGCAATTTCTGTGGATGCAGGTGTCTCGTATTGCTTAATAAATTATATTTTCTTGTCAATCACTAAATTCTGTGATATACTCTGTAGACGGTATACGTCATCTTTGATGTTTATGTTACCAGATTTTGCAATCCCCTCGCATAGTCGAGGTCGTCTACCTTTAGGAGTTGTTATTGCAATTGTGGTTGTAGGGGCAATTATGATTGGCTTGGCTATGCTTTGCTGGATATACTTTGCAAAGGAAAAAAGTACACTTGATCAAAAAGCTTTGGACATGCGAACTGGTTCCTTTACCTTGCGGGAAATTATGGCAGCCACAAACAACTTCGACGATGGCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTCAGATGGAACCGTGATAGCCGTCAAGCAACTCTCTTCTAGATCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTTTGCAGAACCCTCATCTTGTTAAGCTTTATGGATGCTGTGTTGAGGAAAGTCAACTACTTCTGATATATGAGTACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGGCCTAGAAAATTGCTGGCTAGAGCTGGATTGGTCCACAAGAAAAAATATTTGCATTGGTATAGCCAAAGGTTTGGCTTTTCTGCATGAAGAATCAAGACTGAAAATTATTCATAGAGACATTAAGGCCACTAATGTTCTACTTGATAAAGATCTTAATCCCAAGATTTCTGACTTTGGTTTGGCCAAGCTTTATGAAGAGGACAACACACACATTAGCACCAAAATTGCTGGAACTCGTGGTTATATGGCCCCTGAATACGCAATGCATGGATATTTGACCAAGAAAGCAGATGTTTATAGTTTTGGAATTGTACTTCTAGAAATCATCAGCGGCAAAACCAATACCACTCAACTGTCAGTGGAAGAATGTTTTTATTTGCGCGATTGGGCACATCATTTGAAAGGAGGTAATCTGATGGATCTGGTGGATCCAAGGTTGGGTGAGGACTTTAACAGAGAGGAAATAATGGTTGTGATTGATGTGGCTCTCCAATGCACTGAAAACTCTCCAAGACTACGGCCTATCATGTCCAAAGTGCTTAACATTCTTGAAGGCAGGCCTTTTGTTGGAGAGGTAGTCTCAGATGATGAGAGTGAGATTATGGATGGCGACTTGAAATTGGATTGGACGAAGAAAGAAGAAGCTGATGAAGATGAAACCCAGGCGGTAATTTTGTCAAGCCATCGGTCTCATACTACATATAAATCTTTTTCTCAAACGAAATAG 2937 0.4185 MNLILLPFFFARMALGSLVPEEVEALRDIGRTLGKKDWNFSGDPCSRGLSGWNVDCSVGNTGGHIISMDLTRNYLSGIIPPEWGSMKLVKIILLANRLTGSIPAELANISTLEILNIGFNQFSGNLPTELGKLPRLQRLHLASNNFTGQIPATFAGLTNLTHFRISDNKFSGKIPDFIGNWKTLRMLAIVASGLSGPIPAGLSLLVNLVDLRISNLNGPDSNFPQLDNMTKLETIILRSCNIVGSLRLDFTESMSYLLVLDLSFNKLSGEMPSSFTRQSQVKFLYLSGNMLSGPVPDWSIRSENNVDLSYNNFSISNLKPSLCTQQNVNLFANPLGGNKSGLIPCSRVCPKAYYSFRINCGGKEVYVGGKKYDEDLIEGQASQLFVSERSNWAFSNTGHFIDDDQRLSKSYIADNDNNNSGLLFMPNSELYTNARLSPISLTYYGFCLENGNYTVNLHFAEIMFTADKSFRRLGRRVFDVYIQGKLVQKDFNIADAAGAGKAITRNHTVVVNKNDLEIRLYWAGKGTASVPDRAVYGPLISAISVDAGVSYCLINYIFLSITKFCDILCRRYTSSLMFMLPDFAIPSHSRGRLPLGVVIAIVVVGAIMIGLAMLCWIYFAKEKSTLDQKALDMRTGSFTLREIMAATNNFDDGNKIGEGGFGPVYKGFLSDGTVIAVKQLSSRSRQGNREFLNEIGMISALQNPHLVKLYGCCVEESQLLLIYEYMENNSLARALFGLENCWLELDWSTRKNICIGIAKGLAFLHEESRLKIIHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHISTKIAGTRGYMAPEYAMHGYLTKKADVYSFGIVLLEIISGKTNTTQLSVEECFYLRDWAHHLKGGNLMDLVDPRLGEDFNREEIMVVIDVALQCTENSPRLRPIMSKVLNILEGRPFVGEVVSDDESEIMDGDLKLDWTKKEEADEDETQAVILSSHRSHTTYKSFSQTK 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00063 978 SUPERFAMILY L domain-like 53 312 - -
Pral4746g00063 978 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 620 725 - -
Pral4746g00063 978 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 353 548 - -
Pral4746g00063 978 FunFam Putative LRR receptor-like serine/threonine-protein kinase 726 932 - -
Pral4746g00063 978 Gene3D Transferase(Phosphotransferase) domain 1 726 928 - -
Pral4746g00063 978 SUPERFAMILY Protein kinase-like (PK-like) 633 921 IPR011009 -
Pral4746g00063 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Pral4746g00063 978 ProSiteProfiles Protein kinase domain profile. 650 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00063 978 Gene3D - 352 548 - -
Pral4746g00063 978 Gene3D Ribonuclease Inhibitor 19 221 IPR032675 -
Pral4746g00063 978 Gene3D Phosphorylase Kinase; domain 1 615 725 - -
Pral4746g00063 978 Pfam Protein kinase domain 651 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00063 978 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 945 - -
Pral4746g00063 978 Pfam Malectin domain 355 543 IPR021720 -
Pral4746g00063 978 CDD STKc_IRAK 656 922 - -
Pral4746g00063 978 SMART serkin_6 650 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00063 978 FunFam Leucine-rich repeat receptor protein kinase EMS1 57 153 - -
Pral4746g00063 978 Gene3D Ribonuclease Inhibitor 222 338 IPR032675 -
Pral4746g00063 978 Pfam Leucine rich repeat 134 189 IPR001611 GO:0005515
Pral4746g00063 978 Pfam Leucine rich repeat 231 291 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00063 Pral-Chr4746 405088 418236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00063 16 937 Receptor kinase-like Gene Family AT1G53420 50.317 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00063 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00063 - - qsa:O6P43_001072 1047.34