Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00062 ATGAACCTCATTCTGCTGCCATTTTTCTTCGCAAGGATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGACATAGGGAGGACGCTGGGGAAGAAGGACTGGAACTTCAGCGGCGATCCATGCAGCAGAGGACTCAGTGGATGGAACGTCGACTGTTCGGTGGGAAATACCGGCGGCCACATCATTAGCATCAATCTACGAGAAGGGAGTCTTCAAGGAACTCTACCGCCGGAGCTAGTTAGGTTGCCGTACCTTCAAGACCTGGACCTTACACGCAATTACCTCAGCGGCATAATCCCTCCAGAATGGGGCTCTATGAAACTTGTTAAAATCATCCTCCTCGCCAACCGTTTAACGGGTTCAATCCCAGCAGAGCTGGCAAACATTTCCACTCTCGAGATTTTAAACATTGGTTTCAATCAATTTTCGGGAAATCTTCCTACTGAGCTTGGGAAACTACCTCGGCTTCAAAGACTGCATCTTGCTTCAAACAATTTTACTGGGCAAATACCTGCAACATTCGCTGGGCTAACCAACTTGACTCACTTTCGAATCAGTGACAACAAATTCTCCGGAAAGATACCCGATTTCATTGGGAACTGGAAGACTCTCCGCATGCTAGCAATTGTGGCGAGTGGCTTGAGCGGGCCTATTCCTGCTGGACTTTCTCTTTTAGTAAACTTAGTTGATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAATTTTCCACAACTTGATAATATGACAAAGTTGGAAACAATCATATTGAGGAGCTGCAACATTGTTGGATCTCTTCGACTTGACTTTACCGAGAGCATGTCTTATTTGCTTGTGTTGGACCTCAGCTTTAACAAATTGAGTGGAGAAATGCCATCCAGCTTCACACGTCAATCACAAGTGAAATTCTTATATTTGTCAGGAAACATGCTAAGTGGACCAGTGCCTGATTGGTCAATAAGAAGTGAAAACAATGTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTTGAAGCCTTCACTTTGTACACAACAGAATGTGAATTTATTCGCAAATCCTTTGGGAGGAAACAAGTCCGGACTCATCCCATGCTCCAGAGTGTGTCCTAAAGCTTACTATTCGTTCCGCATAAATTGTGGTGGAAAGGAAGTATATGTTGGAGGGAAAAAATACGACGAAGACCTTATCGAGGGACAGGCATCTCAATTGTTCGTGAGTGAAAGATCAAACTGGGCATTCAGTAACACTGGTCACTTCATTGATGATGATCAACGTCTCTCAAAATCTTACATTGCGGATAATGATAATAATAATTCAGGACTACTCTTTATGCCGAATTCTGAACTTTACACAAATGCACGCCTCTCCCCCATTTCTCTGACTTACTATGGTTTTTGTCTGGAGAATGGTAACTACACAGTAAACCTTCATTTTGCTGAGATAATGTTTACTGCTGATAAAAGCTTCAGGCGCTTGGGAAGACGAGTATTTGATGTTTACATTCAGGGAAAATTGGTGCAGAAGGATTTCAATATTGCAGATGCAGCAGGAGCTGGTAAGGCGATCACAAGAAATCACACTGTTGTAGTTAACAAGAACGATTTGGAGATTCGCTTATATTGGGCTGGGAAAGGGACAGCCAGTGTTCCTGATAGAGCGGTATATGGCCCTCTCATATCAGCAATTTCTGTGGATGCAGATTTTGCAATCCCCTCGCATAGTCGAGGTCGTCTACCTTTAGGAGTTGTTATTGCAATTGTGGTTGTAGGGGCAATTATGATTGGCTTGGCTATGCTTTGCTGGATATACTTTGCAAAGGAAAAAAGTACACTTGATCAAAAAGCTTTGGACATGCGAACTGGTTCCTTTACCTTGCGGGAAATTATGGCAGCCACAAACAACTTCGACGATGGCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTCAGATGGAACCGTGATAGCCGTCAAGCAACTCTCTTCTAGATCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTTTGCAGAACCCTCATCTTGTTAAGCTTTATGGATGCTGTGTTGAGGAAAGTCAACTACTTCTGATATATGAGTACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGGCCTAGAAAATTGCTGGCTAGAGCTGGATTGGTCCACAAGAAAAAATATTTGCATTGGTATAGCCAAAGGTTTGGCTTTTCTGCATGAAGAATCAAGACTGAAAATTATTCATAGAGACATTAAGGCCACTAATGTTCTACTTGATAAAGATCTTAATCCCAAGATTTCTGACTTTGGTTTGGCCAAGCTTTATGAAGAGGACAACACACACATTAGCACCAAAATTGCTGGAACTCGTGGTTATATGGCCCCTGAATACGCAATGCATGGATATTTGACCAAGAAAGCAGATGTTTATAGTTTTGGAATTGTACTTCTAGAAATCATCAGCGGCAAAACCAATACCACTCAACTGTCAGTGGAAGAATGTTTTTATTTGCGCGATTGGGCACATCATTTGAAAGGAGGTAATCTGATGGATCTGGTGGATCCAAGGTTGGGTGAGGACTTTAACAGAGAGGAAATAATGGTTGTGATTGATGTGGCTCTCCAATGCACTGAAAACTCTCCAAGACTACGGCCTATCATGTCCAAAGTGCTTAACATTCTTGAAGGCAGGCCTTTTGTTGGAGAGGTAGTCTCAGATGATGAGAGTGAGATTATGGATGGCGACTTGAAATTGGATTGGACGAAGAAAGAAGAAGCTGATGAAGATGAAACCCAGGCGGTAATTTTGTCAAGCCATCGGTCTCATACTACATATAAATCTTTTTCTCAAACGAAATAG 2907 0.4245 MNLILLPFFFARMALGSLVPEEVEALRDIGRTLGKKDWNFSGDPCSRGLSGWNVDCSVGNTGGHIISINLREGSLQGTLPPELVRLPYLQDLDLTRNYLSGIIPPEWGSMKLVKIILLANRLTGSIPAELANISTLEILNIGFNQFSGNLPTELGKLPRLQRLHLASNNFTGQIPATFAGLTNLTHFRISDNKFSGKIPDFIGNWKTLRMLAIVASGLSGPIPAGLSLLVNLVDLRISNLNGPDSNFPQLDNMTKLETIILRSCNIVGSLRLDFTESMSYLLVLDLSFNKLSGEMPSSFTRQSQVKFLYLSGNMLSGPVPDWSIRSENNVDLSYNNFSISNLKPSLCTQQNVNLFANPLGGNKSGLIPCSRVCPKAYYSFRINCGGKEVYVGGKKYDEDLIEGQASQLFVSERSNWAFSNTGHFIDDDQRLSKSYIADNDNNNSGLLFMPNSELYTNARLSPISLTYYGFCLENGNYTVNLHFAEIMFTADKSFRRLGRRVFDVYIQGKLVQKDFNIADAAGAGKAITRNHTVVVNKNDLEIRLYWAGKGTASVPDRAVYGPLISAISVDADFAIPSHSRGRLPLGVVIAIVVVGAIMIGLAMLCWIYFAKEKSTLDQKALDMRTGSFTLREIMAATNNFDDGNKIGEGGFGPVYKGFLSDGTVIAVKQLSSRSRQGNREFLNEIGMISALQNPHLVKLYGCCVEESQLLLIYEYMENNSLARALFGLENCWLELDWSTRKNICIGIAKGLAFLHEESRLKIIHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHISTKIAGTRGYMAPEYAMHGYLTKKADVYSFGIVLLEIISGKTNTTQLSVEECFYLRDWAHHLKGGNLMDLVDPRLGEDFNREEIMVVIDVALQCTENSPRLRPIMSKVLNILEGRPFVGEVVSDDESEIMDGDLKLDWTKKEEADEDETQAVILSSHRSHTTYKSFSQTK 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00062 968 SUPERFAMILY L domain-like 59 361 - -
Pral4746g00062 968 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 610 715 - -
Pral4746g00062 968 Gene3D Ribonuclease Inhibitor 22 176 IPR032675 -
Pral4746g00062 968 FunFam Leucine-rich repeat receptor protein kinase EMS1 126 219 - -
Pral4746g00062 968 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 377 572 - -
Pral4746g00062 968 Gene3D Ribonuclease Inhibitor 177 233 IPR032675 -
Pral4746g00062 968 SUPERFAMILY Protein kinase-like (PK-like) 623 911 IPR011009 -
Pral4746g00062 968 Gene3D Transferase(Phosphotransferase) domain 1 716 918 - -
Pral4746g00062 968 Gene3D - 376 572 - -
Pral4746g00062 968 SMART serkin_6 640 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00062 968 Pfam Leucine rich repeat 158 213 IPR001611 GO:0005515
Pral4746g00062 968 Pfam Leucine rich repeat 255 315 IPR001611 GO:0005515
Pral4746g00062 968 FunFam Putative LRR receptor-like serine/threonine-protein kinase 716 922 - -
Pral4746g00062 968 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 935 - -
Pral4746g00062 968 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Pral4746g00062 968 Gene3D Ribonuclease Inhibitor 243 360 IPR032675 -
Pral4746g00062 968 Pfam Protein kinase domain 641 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00062 968 Pfam Malectin domain 379 567 IPR021720 -
Pral4746g00062 968 CDD STKc_IRAK 646 912 - -
Pral4746g00062 968 Gene3D Phosphorylase Kinase; domain 1 605 715 - -
Pral4746g00062 968 ProSiteProfiles Protein kinase domain profile. 640 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00062 Pral-Chr4746 405088 418236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00062 16 927 Receptor kinase-like Gene Family AT1G53420 52.654 0.0 917
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00062 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00062 - - qsa:O6P43_001072 1112.06