Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00060 ATGAACCTCATTCTGCTGCCATTTTTCTTCGCAAGGATGGCTTTAGGCTCTCTTGTTCCAGAAGAAGTGGAAGCTTTGAGAGACATAGGGAGGACGCTGGGGAAGAAGGACTGGAACTTCAGCGGCGATCCATGCAGCAGAGGACTCAGTGGATGGAACGTCGACTGTTCGGTGGGAAATACCGGCGGCCACATCATTAGCATCAATCTACGAGAAGGGAGTCTTCAAGGAACTCTACCGCCGGAGCTAGTTAGGTTGCCGTACCTTCAAGACCTGGACCTTACACGCAATTACCTCAGCGGCATAATCCCTCCAGAATGGGGCTCTATGAAACTTGTTAAAATCATCCTCCTCGCCAACCGTTTAACGGGTTCAATCCCAGCAGAGCTGGCAAACATTTCCACTCTCGAGATTTTAAACATTGGTTTCAATCAATTTTCGGGAAATCTTCCTACTGAGCTTGGGAAACTACCTCGGCTTCAAAGACTGCATCTTGCTTCAAACAATTTTACTGGGCAAATACCTGCAACATTCGCTGGGCTAACCAACTTGACTCACTTTCGAATCAGTGACAACAAATTCTCCGGAAAGATACCCGATTTCATTGGGAACTGGAAGACTCTCCGCATGCTAGCAATTGTGGCGAGTGGCTTGAGCGGGCCTATTCCTGCTGGACTTTCTCTTTTAGTAAACTTAGTTGATCTGAGAATTAGCAATTTAAATGGACCCGATTCAAATTTTCCACAACTTGATAATATGACAAAGTTGGAAACAATCATATTGAGGAGCTGCAACATTGTTGGATCTCTTCGACTTGACTTTACCGAGAGCATGTCTTATTTGCTTGTGTTGGACCTCAGCTTTAACAAATTGAGTGGAGAAATGCCATCCAGCTTCACACGTCAATCACAAGTGAAATTCTTATATTTGTCAGGAAACATGCTAAGTGGACCAGTGCCTGATTGGTCAATAAGAAGTGAAAACAATGTAGACCTTTCTTACAACAACTTCAGCATCAGCAACTTGAAGCCTTCACTTTGTACACAACAGAATGTGAATTTATTCGCAAATCCTTTGGGAGGAAACAAGTCCGGACTCATCCCATGCTCCAGAGTGTGTCCTAAAGCTTACTATTCGTTCCGCATAAATTGTGGTGGAAAGGAAGTATATGTTGGAGGGAAAAAATACGACGAAGACCTTATCGAGGGACAGGCATCTCAATTGTTCGTGAGTGAAAGATCAAACTGGGCATTCAGTAACACTGGTCACTTCATTGATGATGATCAACGTCTCTCAAAATCTTACATTGCGGATAATGATAATAATAATTCAGGACTACTCTTTATGCCGAATTCTGAACTTTACACAAATGCACGCCTCTCCCCCATTTCTCTGACTTACTATGGTTTTTGTCTGGAGAATGGTAACTACACAGTAAACCTTCATTTTGCTGAGATAATGTTTACTGCTGATAAAAGCTTCAGGCGCTTGGGAAGACGAGTATTTGATGTTTACATTCAGGGAAAATTGGTGCAGAAGGATTTCAATATTGCAGATGCAGCAGGAGCTGGTAAGGCGATCACAAGAAATCACACTGTTGTAGTTAACAAGAACGATTTGGAGATTCGCTTATATTGGGCTGGGAAAGGGACAGCCAGTGTTCCTGATAGAGCGGTATATGGCCCTCTCATATCAGCAATTTCTGTGGATGCAGGTGTCTCGTATTGCTTAATAAATTATATTTTCTTGTCAATCACTAAATTCTGTGATATACTCTGTAGACGGTATACGTCATCTTTGATGTTTATGTTACCAGATTTTGCAATCCCCTCGCATAGTCGAGGTCGTCTACCTTTAGGAGTTGTTATTGCAATTGTGGTTGTAGGGGCAATTATGATTGGCTTGGCTATGCTTTGCTGGATATACTTTGCAAAGGAAAAAAGTACACTTGATCAAAAAGCTTTGGACATGCGAACTGGTTCCTTTACCTTGCGGGAAATTATGGCAGCCACAAACAACTTCGACGATGGCAATAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGCTTCTTGTCAGATGGAACCGTGATAGCCGTCAAGCAACTCTCTTCTAGATCACGTCAAGGGAATCGTGAGTTCTTAAATGAGATAGGGATGATTTCTGCTTTGCAGAACCCTCATCTTGTTAAGCTTTATGGATGCTGTGTTGAGGAAAGTCAACTACTTCTGATATATGAGTACATGGAAAACAATAGCCTTGCCCGTGCTTTATTTGGCCTAGAAAATTGCTGGCTAGAGCTGGATTGGTCCACAAGAAAAAATATTTGCATTGGTATAGCCAAAGGTTTGGCTTTTCTGCATGAAGAATCAAGACTGAAAATTATTCATAGAGACATTAAGGCCACTAATGTTCTACTTGATAAAGATCTTAATCCCAAGATTTCTGACTTTGGTTTGGCCAAGCTTTATGAAGAGGACAACACACACATTAGCACCAAAATTGCTGGAACTCGTGGTTATATGGCCCCTGAATACGCAATGCATGGATATTTGACCAAGAAAGCAGATGTTTATAGTTTTGGAATTGTACTTCTAGAAATCATCAGCGGCAAAACCAATACCACTCAACTGTCAGTGGAAGAATGTTTTTATTTGCGCGATTGGGCACATCATTTGAAAGGAGGTAATCTGATGGATCTGGTGGATCCAAGGTTGGGTGAGGACTTTAACAGAGAGGAAATAATGGTTGTGATTGATGTGGCTCTCCAATGCACTGAAAACTCTCCAAGACTACGGCCTATCATGTCCAAAGTGCTTAACATTCTTGAAGGCAGGCCTTTTGTTGGAGAGGTAGTCTCAGATGATGAGAGTGAGATTATGGATGGCGACTTGAAATTGGATTGGACGAAGAAAGAAGAAGCTGATGAAGATGAAACCCAGGCGGTAATTTTGTCAAGCCATCGGTCTCATACTACATATAAATCTTTTTCTCAAACGAAATAG 3009 0.4207 MNLILLPFFFARMALGSLVPEEVEALRDIGRTLGKKDWNFSGDPCSRGLSGWNVDCSVGNTGGHIISINLREGSLQGTLPPELVRLPYLQDLDLTRNYLSGIIPPEWGSMKLVKIILLANRLTGSIPAELANISTLEILNIGFNQFSGNLPTELGKLPRLQRLHLASNNFTGQIPATFAGLTNLTHFRISDNKFSGKIPDFIGNWKTLRMLAIVASGLSGPIPAGLSLLVNLVDLRISNLNGPDSNFPQLDNMTKLETIILRSCNIVGSLRLDFTESMSYLLVLDLSFNKLSGEMPSSFTRQSQVKFLYLSGNMLSGPVPDWSIRSENNVDLSYNNFSISNLKPSLCTQQNVNLFANPLGGNKSGLIPCSRVCPKAYYSFRINCGGKEVYVGGKKYDEDLIEGQASQLFVSERSNWAFSNTGHFIDDDQRLSKSYIADNDNNNSGLLFMPNSELYTNARLSPISLTYYGFCLENGNYTVNLHFAEIMFTADKSFRRLGRRVFDVYIQGKLVQKDFNIADAAGAGKAITRNHTVVVNKNDLEIRLYWAGKGTASVPDRAVYGPLISAISVDAGVSYCLINYIFLSITKFCDILCRRYTSSLMFMLPDFAIPSHSRGRLPLGVVIAIVVVGAIMIGLAMLCWIYFAKEKSTLDQKALDMRTGSFTLREIMAATNNFDDGNKIGEGGFGPVYKGFLSDGTVIAVKQLSSRSRQGNREFLNEIGMISALQNPHLVKLYGCCVEESQLLLIYEYMENNSLARALFGLENCWLELDWSTRKNICIGIAKGLAFLHEESRLKIIHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHISTKIAGTRGYMAPEYAMHGYLTKKADVYSFGIVLLEIISGKTNTTQLSVEECFYLRDWAHHLKGGNLMDLVDPRLGEDFNREEIMVVIDVALQCTENSPRLRPIMSKVLNILEGRPFVGEVVSDDESEIMDGDLKLDWTKKEEADEDETQAVILSSHRSHTTYKSFSQTK 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00060 1002 Gene3D - 376 572 - -
Pral4746g00060 1002 Gene3D Ribonuclease Inhibitor 243 360 IPR032675 -
Pral4746g00060 1002 Pfam Protein kinase domain 675 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00060 1002 FunFam Putative LRR receptor-like serine/threonine-protein kinase 750 956 - -
Pral4746g00060 1002 SMART serkin_6 674 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00060 1002 CDD STKc_IRAK 680 946 - -
Pral4746g00060 1002 ProSiteProfiles Protein kinase domain profile. 674 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00060 1002 Pfam Leucine rich repeat 158 213 IPR001611 GO:0005515
Pral4746g00060 1002 Pfam Leucine rich repeat 255 315 IPR001611 GO:0005515
Pral4746g00060 1002 Pfam Malectin domain 379 567 IPR021720 -
Pral4746g00060 1002 Gene3D Ribonuclease Inhibitor 169 232 IPR032675 -
Pral4746g00060 1002 Gene3D Phosphorylase Kinase; domain 1 639 749 - -
Pral4746g00060 1002 SUPERFAMILY Protein kinase-like (PK-like) 657 945 IPR011009 -
Pral4746g00060 1002 FunFam Leucine-rich repeat receptor protein kinase EMS1 126 220 - -
Pral4746g00060 1002 Gene3D Ribonuclease Inhibitor 20 168 IPR032675 -
Pral4746g00060 1002 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 377 572 - -
Pral4746g00060 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Pral4746g00060 1002 Gene3D Transferase(Phosphotransferase) domain 1 750 952 - -
Pral4746g00060 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 969 - -
Pral4746g00060 1002 SUPERFAMILY L domain-like 59 361 - -
Pral4746g00060 1002 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 644 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00060 Pral-Chr4746 405088 418236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00060 16 961 Receptor kinase-like Gene Family AT1G53420 51.097 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00060 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00060 - - qsa:O6P43_001072 1094.72