Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00059 ATGACACGTGACGATAATACTCCCTCGGCATCTCCCATTCACATGAACTACAAGTCAATGAGAGTAAACACTTGCTTTGCTATTGTGAATTTTGGCACACAATATTTAACTGGAAACCTTCTCTCTGGACCAGTGCCTGAGTGGGTAGATCGTTCTGGCTTTGTAGATCTTTCCTACAACAACTTCAGCGTCGGAAACCCAGGGCAGCCAACATGTAAAACGGGCAATGTGAACCTGTTTTCAAGCACTTTGACAGGGAATGACTCGGGAGCAGTTCCATGTTTGAGCGGCTTTCGCTGTCCTAAAACATGGTACTCTCTACATATAAACTGTGGTGGCCAGCAATTAACAGTAAACGAAAGTACAATATTTGAAGAAGATTCAGATGGATCAGGATCAGCAAGATTTCACCGGAGTGACACAAATTGGATAATGAGCAGTACTGGTTACTTCATGGATAAAGAACGCGTAGATTACTACACCGTGCGGAATGCATCAGCACTCTCTATAACCAATGCTGAATTATACATGAGTGCACGTGTTTCTCCGCTCTCTCTGAGTTATTTTGCATTTTGCATGGGAAACGGAAACTACACAATAAAGCTCCATTTTGCTGAGATAATGTTCACAGCCGATAAAACATATAGCAGCCTCGGAAGGCGCGTCTTTGACGTCTATATTCAGGGAAAGCTGGTGCTGAAGGATTTCAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGCAGTCGTCAAAGAATTCACTGGTGTTGTGACTAGGAATTCATTGGAGATCCGCCTATATTGGGCTGGGAAAGGGACAACTGCTATACCATACAAATCACTATATGGTCCGCTCATATCTGCCATATCTGTGGATCCTGACTTTAAACCCCCATTGGAAAATGGAAGTAGCATATCTGGAGGGACAGTGGCTGGCATTGTGGTTGCTGGAGCAATGATTGTAATCCTGGTTTTCAGTATACTATGGCGGAGAGGCAGTCTAGCACCCAAAAATTCAATGGCAAGAGAGCTAAGGAGTTTAGATCTGCAAACTGGAATATTTACTTTAAGGCAAATTAAAGCAGCAACAAACAACTTTGACGTTGCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTCTACAAGGGCTTTCTGTCAGATGGTACTATAATAGCAGTTAAGCAACTTTCGTCTAAATCAAAGCAAGGAAATCGGGAGTTTATAAATGAGATAGGCATGATTTCTGCTATGCAACATCCTTGTCTTGTCAAACTTTATGGCTGTTGTGTCGAGAGAGATCAATTGTTGCTGGTATATGAATACATGGATAACAATAGTCTTGCTCGTGCCTTGTTTGGCCAAGAAGGTCAATTACATTTAGACTGGCCGACAAGATACAAGATTTGCATTGGTATTGCTAGAGGTTTGGCTTTCCTACATGAAGAGTCAAGATTGAAGATCGTTCATAGAGACATTAAAGCCACCAATGTGCTGCTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGTTTGGCCAAACTTTATGAGGAGGACAATACCCATGTCAGCACTAGAATAGCTGGGACATATGGATATATGGCTCCTGAATATGCAATGCATGGCCATCTAAGTGACAAAGCAGATGTCTATAGTTTTGGTATTGTTGCATTGGAGCTTGTTAGTGGGAAGAGCAACAACATGAACCATAGCATCCATCTTCTTGAGTGGGCACATTTCTTAAAGGAAAACTACAATCTAATGGAGATAGTTGATCCAAGGTTGAAATCGAAGTTTATAAAAGCAGAGGCTATGGTGATGATCAATGTAGCTTTTCTATGCACAAATGTGACTGCATCACTTAGGCCCAACATGTCCTCAGTGGTAAGCATGCTTGAAGAACGAACAGTTCGGGAGGTGGTTTCAGATGGAAGTGAGGCATTGGATGAGATGAAGAGGCGGAAGTATTACCAAAATATAGGGGAAAATAGCATATCAGTCGGGTCATCATCTATTGATTCACCTACATCAGTTACAGATCTCTATCCTGTTCACTTGGATTCCTCTTACTGGATGAAAAGAAATTAG 2088 0.4176 MTRDDNTPSASPIHMNYKSMRVNTCFAIVNFGTQYLTGNLLSGPVPEWVDRSGFVDLSYNNFSVGNPGQPTCKTGNVNLFSSTLTGNDSGAVPCLSGFRCPKTWYSLHINCGGQQLTVNESTIFEEDSDGSGSARFHRSDTNWIMSSTGYFMDKERVDYYTVRNASALSITNAELYMSARVSPLSLSYFAFCMGNGNYTIKLHFAEIMFTADKTYSSLGRRVFDVYIQGKLVLKDFNIAEEAGGVGKAVVKEFTGVVTRNSLEIRLYWAGKGTTAIPYKSLYGPLISAISVDPDFKPPLENGSSISGGTVAGIVVAGAMIVILVFSILWRRGSLAPKNSMARELRSLDLQTGIFTLRQIKAATNNFDVANKIGEGGFGPVYKGFLSDGTIIAVKQLSSKSKQGNREFINEIGMISAMQHPCLVKLYGCCVERDQLLLVYEYMDNNSLARALFGQEGQLHLDWPTRYKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEDNTHVSTRIAGTYGYMAPEYAMHGHLSDKADVYSFGIVALELVSGKSNNMNHSIHLLEWAHFLKENYNLMEIVDPRLKSKFIKAEAMVMINVAFLCTNVTASLRPNMSSVVSMLEERTVREVVSDGSEALDEMKRRKYYQNIGENSISVGSSSIDSPTSVTDLYPVHLDSSYWMKRN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00059 695 SUPERFAMILY Protein kinase-like (PK-like) 350 635 IPR011009 -
Pral4746g00059 695 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 32 658 - -
Pral4746g00059 695 CDD STKc_IRAK 372 634 - -
Pral4746g00059 695 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 104 294 - -
Pral4746g00059 695 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 335 441 - -
Pral4746g00059 695 FunFam Putative LRR receptor-like serine/threonine-protein kinase 442 643 - -
Pral4746g00059 695 SMART serkin_6 366 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00059 695 Gene3D - 104 293 - -
Pral4746g00059 695 Gene3D Transferase(Phosphotransferase) domain 1 442 655 - -
Pral4746g00059 695 Gene3D Phosphorylase Kinase; domain 1 333 441 - -
Pral4746g00059 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Pral4746g00059 695 Pfam Malectin domain 106 289 IPR021720 -
Pral4746g00059 695 ProSiteProfiles Protein kinase domain profile. 366 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00059 695 Pfam Protein kinase domain 367 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00059 Pral-Chr4746 398397 403661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00059 23 677 Receptor kinase-like Gene Family AT1G53420 55.887 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00059 Pkinase 6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00059 - - qsa:O6P43_001072 899.042