Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00054 ATGATCGATGCTGGACTGTATAAGAATGCCCGTGTTACTCCTATTTCTCTGACTTATTATGGCTTTTGCCTGGAAAATGGAAAATACAGAGGGAACCTTCATTTTGCAGAGATAATGTTCACTGATGATCAAATATATAGCCGCCTTGGAAGGCGTTTATTTGACGTCTACATTCAGGGAAAGAGGGTGCTAGAGAACTTCAACATTGTTGAAAGAGCAGGAGGAGTAGGGAAGGCGGTGATAGAACCATTCACTACTGATGTCACTAATAATACCCTGGAGATTAGATTCTATTGGGCCGGAAAAGGGACAACGGCTATCCCATACAAATCAGTATACGGTCCTCTTATATCTGCTATATCCGCGGAATATGACCCAAAAAATGGAATATCTACTGGGGCCGTGGTAGGAATCGTGCTTGGAGGAGCTGTTATTGTGATCGTGGTATTTGGTATACTTTGGTGGAGAGGCTGTATAGGACGCAGAAGTTCATTGGCGAAAGATCTTGAGGGTTTGCATCTTAGAACTGGTATATTCACCTTCAAGGAAATCAAAGCAGCAACCAACAACTTTAATACAGCTAATAAGATCGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGTATACTCCCAAATGGCACAATTATTGCAGTTAAGCAGCTGTCCACCAAATCAAAGCAAGGAAATCGTGAATTTATAAATGAAATAGGCATGATTTCTGCTTTGCAGCACCCCTATCTGGTTAAGCTTTATGGCTGTTGTGTTGAAGGAGATCAACTGCTGTTAATATATGAGTTCATGGATAATAATAGTCTTGCCCGTGCTTTATTTGGTTTGAAGGAATTTCAATTAAAGTTAGATTGGCCAACAAGACACAAGATTTGCATTGGGATTGCTAGAGGTTTAGCATTCCTCCATGAGGAATCAAGATTGAAGATTGTTCATAGAGACATTAAGGCCACTAATGTGCTACTTGATAAAGATCTCAATCCCAAGATATCTGATTTTGGTTTGGCCAAACTTGTTGAAGAGGACAATACTCACATAAGCACTCGAATTGCTGGCACTTATGGATACATGGCACCTGAATATGCGATGCATGGTTACTTAACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTCAGTGGGAGGGTCAACACTATTCACCGAGCAAAGGAGGAAGCAATCTATCTTCTTGACGGGAACTTAGCTTCCAGTCTCTCATCATCAGGAACAAATGCAACCTGCTGTTTCAAGAAGGGCCTACTTTGTCCAAGAACACCTCAATATAACTCGTTGTTCATTAACTGTGGAGGACCAAAGATGAAGTTTGAGGGGAACGAATGTGAAGAAGATCCCAATCCAAATGGCATTTCGTACTTCAATATCAAAGATGACAAATGGGCTTATAGCAGCACAGGAACATATATATTTAACGATAAAGCTGATTATGTAACAAGTGTGACAAAAAATAAGTTTTCTTTGATTGTTAATGGCTCAGAATACTATCAAACAGCCCGTCTTAGCCCCTCGTCACTCAAGTACTATGGCCTATGCATGCTAAAGGGTAATTATAAAGTAAAGCTCCACTTTGTAGAGATAATGTTTTCTAGTGACCAAAAATTTAGCAGCCTTGGTACACGCATATTCGATGTTTCAATTCAAGGTTTGAAATGCTTGAAAGATTTTAATATTACGAAGGAAGCTGGTGGAGTTGGTAAGGGCATCACTAAGGAATTTGATGTTGATGTGAACGATACCACTTTGGAGATTCATTTATATTGGACAGGGAAAGGAACTACTTCGATTCCCACTAGAGGTGTATACGGACCTCTAATATCTACTATCACAATGATGCCAAATTTCAAAGTTCCTTCACAAGGGCTCTGTGTTGATAACCAAAGGAATGATAAAGGGTTTTCAGCCAGAGCTATTGTTGGAATTATGGTTGGATTATGTCTATTCCTCATAGTGGTATTACTCATTATCCTTCGAAAGAATAGTTTCCTTGATGGGAAAAATTCACAAGACATAGATCTTAAAGGCTTGGATCTTAAAACTGGTATATTTACCTTGAAGGAAATCAAAGCAGCAACGAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGCACATCAGTTGAAAGACGGAGGTAATCTGATGGATCTGGTGGATCCAAAGTTGGGTGAGGACTTTAATAGAGAGGAAATAATGACTGTGATTGATGTGGCTCTCCAGTGCACTGAAAACTCTCCAAAACTCAGGCCTACCATGTCTAAAATGCTTAGCATTCTTGAAGGCAGGCCTGCTGATCTGGAGGTAGTCTCAGATGATGAAAGTGAGATTATGGATGATGACTTGAAACTGAAATTGGTCATGAAAGAAGAAGCTGATAAAGATGAGACCAATCAGGCCATAAACTCGTCAAGCCATGAGTCTCAGACCACATCTCAACCCTTTTCAGAATTCTATTCGGCCAGTAAAGATTCTTCTTCCTGGGAGAAAACCATCTAG 2556 0.3998 MIDAGLYKNARVTPISLTYYGFCLENGKYRGNLHFAEIMFTDDQIYSRLGRRLFDVYIQGKRVLENFNIVERAGGVGKAVIEPFTTDVTNNTLEIRFYWAGKGTTAIPYKSVYGPLISAISAEYDPKNGISTGAVVGIVLGGAVIVIVVFGILWWRGCIGRRSSLAKDLEGLHLRTGIFTFKEIKAATNNFNTANKIGEGGFGPVYKGILPNGTIIAVKQLSTKSKQGNREFINEIGMISALQHPYLVKLYGCCVEGDQLLLIYEFMDNNSLARALFGLKEFQLKLDWPTRHKICIGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRVNTIHRAKEEAIYLLDGNLASSLSSSGTNATCCFKKGLLCPRTPQYNSLFINCGGPKMKFEGNECEEDPNPNGISYFNIKDDKWAYSSTGTYIFNDKADYVTSVTKNKFSLIVNGSEYYQTARLSPSSLKYYGLCMLKGNYKVKLHFVEIMFSSDQKFSSLGTRIFDVSIQGLKCLKDFNITKEAGGVGKGITKEFDVDVNDTTLEIHLYWTGKGTTSIPTRGVYGPLISTITMMPNFKVPSQGLCVDNQRNDKGFSARAIVGIMVGLCLFLIVVLLIILRKNSFLDGKNSQDIDLKGLDLKTGIFTLKEIKAATNNFNADNKIGEGGFGPVYKAHQLKDGGNLMDLVDPKLGEDFNREEIMTVIDVALQCTENSPKLRPTMSKMLSILEGRPADLEVVSDDESEIMDDDLKLKLVMKEEADKDETNQAINSSSHESQTTSQPFSEFYSASKDSSSWEKTI 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00054 851 SUPERFAMILY Protein kinase-like (PK-like) 694 733 IPR011009 -
Pral4746g00054 851 Gene3D Transferase(Phosphotransferase) domain 1 267 424 - -
Pral4746g00054 851 Pfam Protein kinase domain 192 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00054 851 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 727 821 - -
Pral4746g00054 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Pral4746g00054 851 Pfam Malectin domain 3 120 IPR021720 -
Pral4746g00054 851 Pfam Malectin domain 438 622 IPR021720 -
Pral4746g00054 851 MobiDBLite consensus disorder prediction 808 851 - -
Pral4746g00054 851 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 160 266 - -
Pral4746g00054 851 SUPERFAMILY Protein kinase-like (PK-like) 177 403 IPR011009 -
Pral4746g00054 851 ProSiteProfiles Protein kinase domain profile. 191 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00054 851 MobiDBLite consensus disorder prediction 817 851 - -
Pral4746g00054 851 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 436 627 - -
Pral4746g00054 851 Gene3D - 1 123 - -
Pral4746g00054 851 Gene3D - 437 627 - -
Pral4746g00054 851 SMART serkin_6 191 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00054 851 Gene3D Phosphorylase Kinase; domain 1 161 266 - -
Pral4746g00054 851 Gene3D Phosphorylase Kinase; domain 1 675 743 - -
Pral4746g00054 851 FunFam Putative LRR receptor-like serine/threonine-protein kinase 267 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00054 Pral-Chr4746 305525 324227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00054 728 804 Receptor kinase-like Gene Family AT1G53420 40.260 1.90e-12 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00054 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00054 - - qsa:O6P43_001072 632.484