Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00052 ATGTCAAGCTCCAAAGTTGTCTCTGTTTTCTTCTTCGGATTTTTGCTTCTCTGTTTCTTCACAGACTCTCCTGCCAACGCTCAACTTATACCCCAAGATGAAGTGAAGGCACTACAGGCAATATCTGATAAACTCACAAATGTGAATTGGAAGGTTACACAGAGCTCTTGCAACAATGGAGACCCAGGATTTAATAAACTCGTTTCTTCATCCTCTGGACCAACCAGGAATGTCACTTGCGATTGCAGATTCCAAAACGGCAGCGTTTGCCATGTCACACACATCCTATTGAAAAGACTGAATATAGCAGGAGAAATACCCAGTGAATTTGGAAATCTTACACAACTGATTGAACTTGATCTCACTCGCAACTATCTCAATGGCACAATCCCAACAGTTTTTACGCGCATCCCTCTTGTCAATCTGTCCCTGTTGGGGAATCGCATTAGTGGTTTGATTCCCGCAGAATTGAGTAAAATTGCTACTCTACAGGAGCTGGTCTTGGAAGATAATCAGCTTGGAGGACCTCTTCCTCAGAGTCTTGGAAATTTGCGCAACCTACGGAGACTACTTCTTTCTGCAAATTATTTTACTGGGGTAATACCAGAAACGTTTGGAAATCTCAAGAACCTTACTGAATTTAGGATAGATGGGAGCAGTTTATCAGGGAAGATACCTAGTTTTATTGGGAACTGGACCAAAGCTACTATTCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTTCCACCATATCCTTGCTGACTAACTTGAGAGAATTGAGAATATCGGACTTGAATGGAACAACTATGAGATTTCCTAATCTAAGGGATTTGAAGGTTTTGGAACGACTAATATTGAGAAATTGCCTAATTGTTGGTCCCATTCCAAATGACTTCAGCGAGATGACAAAATTAAAGACTCTAGACCTGAGCTTTAACAGGTTGACGGGTCCAATCCCTCCTTCATTTCAGGACTTGAAATTTAATCACATGCTTCTGACGAACAATTTTCTGAGTGAAGCAATTCCAGGGTGGATGCTTAAGAACACACAAAATATTGATTTATCTTACAACAATTTTACTGAGACTTCTGCATCTCTTTGCCAGCTGTCGGATGTGAATTTGGCTTCCAGTCTCTCATCTTCAGTAAGCAATCCACTCTTGTGTTTGAAGAAGGGCCTACCTTGTGAGGGAAACTCATATTATCATTCACTGTTCATAAACTGTGGAGGACCCAAGATGGAGTTCAATGGTCACGAATATGAAGAAGATTTAAATCGAGATGGCATTTCATATTTTAAGTTTCAAAACAACTGGGCTTATAGCAGTACAGGGGTATTCATGAATAATGATACCGCTGATTTTGTAGCAACAAGTTCATCTTCCTTGAATGGGAGTAGCCCCGAATACTACCAAACAGCCCGTCTTAGCCCTCTATCCCTTAAGTACTATGGCTTATGTATGATGAAGGGCAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAAACATATAGCAGCCTTGGTGTGCGCATTTTTGATGTTTCAATTCAGGGCTTTAAATACTTGAAAGATTTCAACATTGCGAAGAAGGCAGGTGGAGTTGGTAATGACATCACGAGGGAATTTGATGTTGATGTGAATGATAGCACCTTAGAGATCCATTTATACTGGGCAGGGAAAGGAACTACTGCTATTCCCGATAGAGGTGTATATGGACCTCTAATATCTGCCATTACTGTGACCCCAAACTTCAAAGTTCCTTCAAAAGGGTTGTCCACTGGAGCTATTGTTGGAATTGTATTTGGATCATGTGTTTTCCTCGTATTGGTACTCTTTGTCCTCCGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCAAAAGATAGAGAACTTTTAGATCTTAAGACAGGCTATTTTTCTCTAAGACAAATCAAAACAGCCACCAATAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGATTTGGGCCAGTGTATAAGGGTGTGCTGTCAGATGGCGTAGTCATTGCTGTTAAGCAGCTCTCTTCCAAGTCAAAGCAAGGGAATCGTGAATTTGTTAATGAGATAGGAATGATCTCTGCATTGCAGCACCCGAATCTTGTGAAGCTTTATGGTTGTTGCATAGATGGAAATCAACTAATGCTTTTATATGAATACATGGAGAATAATTGTCTTGCTCGAGCACTTTTTGGCCACGAAGAACAGAGGATACACTTGGATTGGTCCTCAAGATTGAAGATTTGTTTGGGGATAGCAAGGGGATTAGCTTATCTTCATGAGGAGTCTAGATTAAAAATAGTACATAGGGACATTAAGGCAACAAACATCTTACTTGATAAGGACTTAAATGCCAAAATTTCTGATTTTGGCCTAGCGAAGCTTGATGAAGAGGAGAATACTCATATCAGTACCCGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTATTTGACAGACAAAGCAGATGTATATAGCTTTGGAGTTGTTGCTCTGGAAATTGTTAGTGGAAAGAACAACATGAATTACCGGCCAAAGGATGAGTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAACTAGTGGATCCGCGGCTTGGTTCAAGCTACTCCCAAGATGAGGCCATGAGAATGCTCAACTTGGCTCTTTTGTGCACCAACCCATCTCCCACCCTCAGGCCAGCCATGTCATCCGTGGTGAGTATGCTTGAAGGAAATATTCCAGTTCAAGCTCCAATAATCAAGCTCAAGGATTCAAGCCAGGATCATCAGGATGCAAGGTTCAAAGCCTTTGAGATGCTATCACACGACAGCCAGACCTCTATAGCTTCTCAAACAAGTAGGGAGCAAAGAGGCAAGTCAATGGATGGGCCATGGATTGATTCTTCAATATCTCTTCCGAGTACAGATGATTACTCTTCATCTAGCAAGCTTCTTTGA 3018 0.4125 MSSSKVVSVFFFGFLLLCFFTDSPANAQLIPQDEVKALQAISDKLTNVNWKVTQSSCNNGDPGFNKLVSSSSGPTRNVTCDCRFQNGSVCHVTHILLKRLNIAGEIPSEFGNLTQLIELDLTRNYLNGTIPTVFTRIPLVNLSLLGNRISGLIPAELSKIATLQELVLEDNQLGGPLPQSLGNLRNLRRLLLSANYFTGVIPETFGNLKNLTEFRIDGSSLSGKIPSFIGNWTKATILNMQGTGMEGPIPSTISLLTNLRELRISDLNGTTMRFPNLRDLKVLERLILRNCLIVGPIPNDFSEMTKLKTLDLSFNRLTGPIPPSFQDLKFNHMLLTNNFLSEAIPGWMLKNTQNIDLSYNNFTETSASLCQLSDVNLASSLSSSVSNPLLCLKKGLPCEGNSYYHSLFINCGGPKMEFNGHEYEEDLNRDGISYFKFQNNWAYSSTGVFMNNDTADFVATSSSSLNGSSPEYYQTARLSPLSLKYYGLCMMKGNYKVKLHFAEIMFSDDQTYSSLGVRIFDVSIQGFKYLKDFNIAKKAGGVGNDITREFDVDVNDSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVFGSCVFLVLVLFVLRKKGFLGGKDPKDRELLDLKTGYFSLRQIKTATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLLYEYMENNCLARALFGHEEQRIHLDWSSRLKICLGIARGLAYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKNNMNYRPKDEFVHLLDWAYVLQEQGNLLELVDPRLGSSYSQDEAMRMLNLALLCTNPSPTLRPAMSSVVSMLEGNIPVQAPIIKLKDSSQDHQDARFKAFEMLSHDSQTSIASQTSREQRGKSMDGPWIDSSISLPSTDDYSSSSKLL 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00052 1005 Gene3D - 405 591 - -
Pral4746g00052 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Pral4746g00052 1005 Gene3D Ribonuclease Inhibitor 33 162 IPR032675 -
Pral4746g00052 1005 Gene3D Ribonuclease Inhibitor 169 270 IPR032675 -
Pral4746g00052 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 201 268 - -
Pral4746g00052 1005 SUPERFAMILY L domain-like 87 328 - -
Pral4746g00052 1005 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 969 - -
Pral4746g00052 1005 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 591 - -
Pral4746g00052 1005 Pfam Malectin domain 407 586 IPR021720 -
Pral4746g00052 1005 Gene3D Ribonuclease Inhibitor 271 382 IPR032675 -
Pral4746g00052 1005 FunFam Putative LRR receptor-like serine/threonine-protein kinase 734 941 - -
Pral4746g00052 1005 SMART LRR_typ_2 184 207 IPR003591 -
Pral4746g00052 1005 SMART LRR_typ_2 304 327 IPR003591 -
Pral4746g00052 1005 SMART LRR_typ_2 113 136 IPR003591 -
Pral4746g00052 1005 SUPERFAMILY Protein kinase-like (PK-like) 643 948 IPR011009 -
Pral4746g00052 1005 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 630 733 - -
Pral4746g00052 1005 Gene3D Phosphorylase Kinase; domain 1 630 733 - -
Pral4746g00052 1005 SMART serkin_6 658 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00052 1005 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 34 200 - -
Pral4746g00052 1005 Pfam Leucine Rich Repeat 306 328 IPR001611 GO:0005515
Pral4746g00052 1005 Pfam Protein tyrosine and serine/threonine kinase 662 926 IPR001245 GO:0004672|GO:0006468
Pral4746g00052 1005 ProSiteProfiles Protein kinase domain profile. 658 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00052 1005 MobiDBLite consensus disorder prediction 965 1005 - -
Pral4746g00052 1005 CDD STKc_IRAK 664 931 - -
Pral4746g00052 1005 MobiDBLite consensus disorder prediction 987 1005 - -
Pral4746g00052 1005 Gene3D Transferase(Phosphotransferase) domain 1 734 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00052 Pral-Chr4746 255416 265067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00052 10 996 Receptor kinase-like Gene Family AT1G53440 62.363 0.0 1231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00052 PK_Tyr_Ser-Thr 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00052 - - qsa:O6P43_001071 1370.53