Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00047 ATGAGACGACCCTTTTTGCTCACGCTAGGCTTCTTTACCTTCTTGTGTGTTGTTTCTGCTCTGAGCCCTGATGGATTGTCTCTGCTTTCTCTGTCACAGCATTGGACATTTGTGCCTCCTTCCATAAGCTCAAGCTGGAATATCTGTGACTCAACTCCCTGCTCATGGGTAGGAATCCAGTGTGACAATGCCCACAGTGTTATCTCCATTAACCTCACTTCTTTTTCGATTGTTGGTCAGTTAGGACCAGAAATAGCACAGTTGAGTCACTTGCAAACTCTTATTTTTTATTCTAACAGTCTCTCAGGAAGAATTCCCCCTCAGATAGGCAATTGTAGTATGCTTGTTTATTTGGACCTTTCTGAAAATGACTTCACAGGGAAAATACCAAGTGCCTTAAGCAACAGTAGTATGCTTGAGCACTTGGATCTTTCTGAAAATTCTCTTACTGGGGAAATTCCAAATAGCTTTAAAAGTTTGCAAAACTTGCGATATTTCAACCTTTATTCCAATCTAATTTTTGGTGGAATTCCTATATACTTGTTTGATTTTCCTCAGTTAGACACTGTGTTTTTGGAATTGAACAACCTAAGTGGTCCTATCCCCATGAATATTGGCAATAGCACCAAACTTCGGAGGTTGTATCTGGAAAATAATCTCTTGTCTGGGATGATGCCCTCTTCCATTGGAAACTGCACCAAATTAGAGGAAGTTAGTCTAGGTAAGAACAGTTTACAGGGGATCTTACCTCAAAGTCTTAACAATCTCTATAATCTTGCTTATTTCGATGTAAGTTTTAATAATCTTAAAGGTCCAATTCTATCAGGTTCTGGTAATTTTAAGAGTCTATATTTTTTGGATCTGTCATACAACGTATTTAGTGGGGGTATTCCTGCTGGATTAAGGAACTGTACTGGCTTGACACAAGTTTTTGCTGTCAACAGCAACTTAACAGGCAACATTCCAGATTTCTTTGGCCTACTTACCAAACTTTCTATTCTTCGCCTCCCTATGAACCGTTTGTCTGGACAAATACCTAAAGAAATAGGCCGTTGTAGGTCTTTGAAGGAGTTGATTTTACATCACAATGAACTTGAGGGAGAAATTCCTAGTGATTTAGGGATGCTAACTGAGTTGGAGGATTTGCAATTGTTTTACAATAAGCTCACGGGTGAAATCCCAATTAGCATATGGAAAATTCCAAGTCTTGTGAATATTTTTTTGTACAGCAATAGCTTTCATGGGGAGCTGCCTTTAGAGGTCACCGAACTTAAGCAGCTACAAAAAATCTCACTGGCTGACAACAACTTTTCTGGAGCTATACCTCAAAATTTAGGAATAAATAGTAGTTTGGTGTGGTTGGATTTGACAAATAACAGTTTTACTGGTAGACTCCCTCCAAATCTTTGTTTTGGAAAGAAATTAGAAAGGCTAGTTGTGGGTATTAATCAACTGCAAGGTGGCATACCTTCTGATATAGGAGCTTGCACAACTCTCAAAAGGTTGATTCTCAAATCCAATAACTTCATGGGACCTCTTCCTAATTTGGAAAATGATATGAATCTTGATTACATGGACATCAGTGACAATAACATCAGCGGAGCAATTCCATCAAGTTTAGGGAATTGCAAAAATCTCACTGATATTGATTTGTCCATGAACAAACTTTCAGAGTTCATACCCTCAGAGCTAGGAAAACTTGCAAATCTTCGGAAGCTGAATCTTTCTGACAACAATTTGCAAGGTCCTTTGCCTCCTCCACTATCAAATTGTATCAAAATGGACTACTTTGATGTAGGATTCAATTACTTAAACGGTTCATTGCCTGCAAGTTTGAGCAAATGGACAGGGCTATCAACTTTGATATTAAGAGATAATCATTTTACCGGAGGCATCCCAACTTTCTTAACAAAATTTGAAGTGCTCTCAGAGCTACAACTTGGAGGCAATGCATTTAGAGGTGAAATTCCTAGCTTAATTGGATCATTGCAGAATCTGCTATATGGGTTGAATTTAAGTGCTAATGGGTTGGTAGGTGATGTTCCATTAGAGATTGGGAAATTGAACATGCTTTTGAAACTAGATTTATCTCTTAACAATCTATCCGGAAGCGTAGAAGTTCTTGAACAACTCTCTTCATTAGTTGAAGTCAATATCTCGTTCAATTCATTTACTGGTCCTGTACCAAATGCATTGCTGAAGCTGATGAGTTCTCAACCATCGTCGTTGTTGGGTAATCCTGGTTTATGTGTTAATTGTTTGCCCTCAGATAGCTCAAATTGCCCTAAGGTTGTCAGTTTAAAGACTTGTGGCTCCATGTCAAGTCATCATAAAGGACTGAGTAAAATTAAAATCATAGTGATATCACTTGGATCCTCTATTTTTGTTCTTCTGTTGTTAGGACTGGCTTTTATGCTTCTCCTTTGCAAAAGATCAAGGCATATTATCAGAATGTTTGTTAGTCATGGTTCATCTTCCTTTCTCAAGAAAATCATGGAGGAAACAGAGAACCTAAATGATAAGTATATAATTGGCAGAGGAGCTCATGGAGTTGTCTATAAGGTTTCTCTGGATTCAAAAAATGTTTTTGCTGTGAAGAAGCTTCCGTTTTCCAACAATGGAGGGCAAAGCAAAAGCATGAGGAGAGAACTTGACATTGTTGGCAAGATTCGTCACCGGAATCTGATCAGATTGAAGAACTTCTGTTTCGGAAAGGATTATGGCTTGATCATGTACAACTTCATGCAAAATGGAAGCTTGCATGATGTTTTGCACGAAATGAATCCACCACCATCCTTGGCTTGGGGTGTTCGCTATAAGATAGCTCTTGGAATTGCTCATGGATTGGCATACCTTCATTTTGATTGTGATCCGACCATAGTACACCGAGACATCAAACCACGAAACATACTCTTAGATTCTGACATGGAGCCTCATATTTCTGATTTTGGTATTGCCAAGGTGTTGGATCAAATCACTGATTCAACAACATCTATAGCTGTTCCTGGCACAGTGGGGTACATTGCACCAGAGAATGCATTTTCAACTGTAGTAAGCAGAAAATCTGATGTATATAGTTATGGAGTAGTTTTGCTTGAGCTATTGACCAGAAAGAAGGTGCTAGATGCTTCATTCATGGAGGGAACAGATATAGTGGGGTGGGTTAAATCTGCATGGGAAGAATCAAGGGAAATTGATGGGATTATTGATCCAAGCCTTGATGATGAACTTTGGGATTCAAACGTAAGGGAAGAAGTTGAACAAGTGCTTTTGGTCGCATTGAGATGTACTGAGAAGGATCCAAGTTTGAGACCAACGATGAGAGAAGTCATCAGCCAACTGATTATTAGAAGCAAAGCTTGTGTTGATAAGAAGTAA 3378 0.3881 MRRPFLLTLGFFTFLCVVSALSPDGLSLLSLSQHWTFVPPSISSSWNICDSTPCSWVGIQCDNAHSVISINLTSFSIVGQLGPEIAQLSHLQTLIFYSNSLSGRIPPQIGNCSMLVYLDLSENDFTGKIPSALSNSSMLEHLDLSENSLTGEIPNSFKSLQNLRYFNLYSNLIFGGIPIYLFDFPQLDTVFLELNNLSGPIPMNIGNSTKLRRLYLENNLLSGMMPSSIGNCTKLEEVSLGKNSLQGILPQSLNNLYNLAYFDVSFNNLKGPILSGSGNFKSLYFLDLSYNVFSGGIPAGLRNCTGLTQVFAVNSNLTGNIPDFFGLLTKLSILRLPMNRLSGQIPKEIGRCRSLKELILHHNELEGEIPSDLGMLTELEDLQLFYNKLTGEIPISIWKIPSLVNIFLYSNSFHGELPLEVTELKQLQKISLADNNFSGAIPQNLGINSSLVWLDLTNNSFTGRLPPNLCFGKKLERLVVGINQLQGGIPSDIGACTTLKRLILKSNNFMGPLPNLENDMNLDYMDISDNNISGAIPSSLGNCKNLTDIDLSMNKLSEFIPSELGKLANLRKLNLSDNNLQGPLPPPLSNCIKMDYFDVGFNYLNGSLPASLSKWTGLSTLILRDNHFTGGIPTFLTKFEVLSELQLGGNAFRGEIPSLIGSLQNLLYGLNLSANGLVGDVPLEIGKLNMLLKLDLSLNNLSGSVEVLEQLSSLVEVNISFNSFTGPVPNALLKLMSSQPSSLLGNPGLCVNCLPSDSSNCPKVVSLKTCGSMSSHHKGLSKIKIIVISLGSSIFVLLLLGLAFMLLLCKRSRHIIRMFVSHGSSSFLKKIMEETENLNDKYIIGRGAHGVVYKVSLDSKNVFAVKKLPFSNNGGQSKSMRRELDIVGKIRHRNLIRLKNFCFGKDYGLIMYNFMQNGSLHDVLHEMNPPPSLAWGVRYKIALGIAHGLAYLHFDCDPTIVHRDIKPRNILLDSDMEPHISDFGIAKVLDQITDSTTSIAVPGTVGYIAPENAFSTVVSRKSDVYSYGVVLLELLTRKKVLDASFMEGTDIVGWVKSAWEESREIDGIIDPSLDDELWDSNVREEVEQVLLVALRCTEKDPSLRPTMREVISQLIIRSKACVDKK 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00047 1125 FunFam Serine/threonine-protein kinase-like protein CCR4 915 1125 - -
Pral4746g00047 1125 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 807 914 - -
Pral4746g00047 1125 Pfam Leucine rich repeat 115 173 IPR001611 GO:0005515
Pral4746g00047 1125 Pfam Leucine rich repeat 210 269 IPR001611 GO:0005515
Pral4746g00047 1125 Pfam Leucine rich repeat 521 580 IPR001611 GO:0005515
Pral4746g00047 1125 SUPERFAMILY L domain-like 22 310 - -
Pral4746g00047 1125 SUPERFAMILY Protein kinase-like (PK-like) 819 1116 IPR011009 -
Pral4746g00047 1125 Gene3D Ribonuclease Inhibitor 474 761 IPR032675 -
Pral4746g00047 1125 Gene3D Ribonuclease Inhibitor 272 363 IPR032675 -
Pral4746g00047 1125 SUPERFAMILY L domain-like 245 635 - -
Pral4746g00047 1125 ProSiteProfiles Protein kinase domain profile. 838 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00047 1125 PRINTS Leucine-rich repeat signature 139 152 - -
Pral4746g00047 1125 PRINTS Leucine-rich repeat signature 567 580 - -
Pral4746g00047 1125 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 473 759 - -
Pral4746g00047 1125 SUPERFAMILY L domain-like 587 751 - -
Pral4746g00047 1125 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 373 1114 - -
Pral4746g00047 1125 SMART serkin_6 838 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00047 1125 Gene3D Ribonuclease Inhibitor 24 176 IPR032675 -
Pral4746g00047 1125 Gene3D Ribonuclease Inhibitor 364 473 IPR032675 -
Pral4746g00047 1125 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Pral4746g00047 1125 Gene3D Transferase(Phosphotransferase) domain 1 915 1123 - -
Pral4746g00047 1125 Gene3D Phosphorylase Kinase; domain 1 807 914 - -
Pral4746g00047 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Pral4746g00047 1125 FunFam Leucine-rich repeat family protein 23 182 - -
Pral4746g00047 1125 FunFam Leucine-rich repeat receptor protein kinase EMS1 345 444 - -
Pral4746g00047 1125 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 297 - -
Pral4746g00047 1125 SMART LRR_typ_2 209 231 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 232 255 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 424 448 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 328 352 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 160 184 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 567 591 IPR003591 -
Pral4746g00047 1125 SMART LRR_typ_2 88 112 IPR003591 -
Pral4746g00047 1125 Pfam Protein kinase domain 841 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00047 1125 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Pral4746g00047 1125 Gene3D Ribonuclease Inhibitor 177 271 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00047 Pral-Chr4746 225735 229490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00047 13 1114 Receptor kinase-like Gene Family AT1G73080 49.373 0.0 996
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4746g00047 Pkinase 6.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00047 - - pcin:129315433 1608.19