Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00015 ATGATACAAAACAAAGAAATAGAGGATTTATATGATGACAGCTTTGAAGGTTCTAATGATGAAAGACGGATTTTTACTGAGGTATTTTTCAGTAAAGACAGTGTTCAGCCTAGTCAGAGGTGTCTGGTTACTGGAGTCATCAACTTTGAATGTGAATCTAGTAAAAACACAAATATTTCACTCTGCTCCAGCAATGAAAACTCAGTTTTAACAAGCCCCTCTTCTTCAAAAGTGACCCATTCTGAGGATGATTGTGATGTGGTTCAGAATTTCAACGAGACCGCTCTTGATTCTGTGCCTGAGAGATTCAATTATGAAGGCCCAAATCATGAGGATGTAAATGTCAAACGCATGAAATTTTCCCTGCATCAACTACCCTGTAGTAGATCCAATTTCAAAAAGGTTTTGAATTCACCAACACTTCTAAAAGAATATGTTACTGACGTGTCTGGTGCTGTTACAGACTTTGATAGTAAACCACTTTCTCTTCGTTTAGTTGAATCATCAAAGAATGGTGTGATATCTAGTTGCTATCTGTTGAGGCATAGCATGATGCTGAACAAAAAAAGAGCTAAGGATGGTGTAGATGTTTCAAATTGTAAAAAAACCTCTGCAGATGGAAATTTGGCCAAAGAAGTAGCTACAAGTAAAGTGACTGCTTCTCCTGTTTCCCAAGAGAGTTTCGCAAATAGGCTTGCAGTAACAAGTTCATCAATCACTGCTGTGGAGAAATCTGGATCTCATTTGCAACTTGAGGAGATGCCTAAAGGATCTTTATCCTATGTTGTGGATAAGTCAAATTTATCATTGACACCTGAACTTAAGAAGGACCCCCGTGATTTATTGCATTACCGTTGTGTGCAGTTGCTTATGATGGCAGGATGGTCTATTGAAAAGCGTAAGAGACCTTGTAGACGCTACTTTGAGTCAGTCTATTGGACACCAGAAGGAAGGCCAGTTCGTGAGTTTATAAAAGCTTGGAGGTTATGTGGTCAGTTTTTGTCTGCTGACAAATACAATTCGATGCAGGATAATTGTAAAGAATGGACTGATATTAGTCAATTCTGGTCTGATCTATCCAGTGCATTGATAAATGTTGAAAAGGCAATGAGCCAGTCAGAGCCTGCTGCCATGCTAGCTTATCAGTGGTGGCTCCTGGACCCTTTTGTAGTAGTAATTTTTGTTAAACGAAAGATTGGTGCACTGAAAAAGGGGGAGCTAGTGAGGGTGAGTCGAAGTATAGTTTCTAGAAATTATAGGATGGCATGTACTACCAAAAGTTCAACTTGGAAGGATACTTCTGCAGCTCGATTTGATCTGAAACATGACTCAGCTTTTCTTTTTGATTCTGCTACTGCCACAACATCTCTGCTCAACTACCATGCCAGTAATCAGAAAACCGGGGATGGAAATAACGTAGGATATGAACAGACAATTAATGGGGTAATAAAACTACCAATATATGAAAGCAATAGCATTATTAACCAGGAAGAGATGTACTTAGAACACAATGCTGACGGCATAGGAAATCAATGTAGGAAAGTATCTGTGTATGAAAGGAGTAGTCTTGGTGTAGGCTTGTTACCTGATGACGGGTTGGGTTTTACTGGTACACGGTCAAGTGCTTGTACTTCCAATGTTACTATAACTTCTGGAAATTCAAATCAGGTATTTAGAGGGCTTGAGGTAAACACTTCTCTGGAGAGCAATGTTAGAAATTTTGAAAGCTCTGATCAAAAGTACTCGGAAAATTTGTTGGAAACAAGCAAGATAGTTGATGGGGATGTGCTAATGGGCGAGGCAGAGGAAAAGGATCCGTTGAATGGCAAAGTTCAGGATCTTTGTGGAAGTTATCTGGAGGAAGACCTGAATAGATATCCACATGGACCAAGACGTGGCTTGGTTCATTGTCCTGCCTCAGAGGCTGTTCAGCAGTCTGAATATGGTGAGGAAGGGGGTGAAAAAGGCTCAAGAGCTTCTGTGCAGACTGTGGTTGAGACAGCCAACACATGTTCTACCCCTGATGTTACTCTGAAAAAGAAAATACGGAGGAAGTGTAAAAGGGTATCTGAAATCAAACTGAGTATGTTATATGAAAGTGACATGATGGGTTCTACAGTTACAGATGAGTTTCAATTAACAAATGGTGACTTATGTGGTAATCACTTAGAACTTGAAGAGGGTGAGCATGTAGTTGACAATGCAGAGGATAGAGGAGTCCACAGGAAATTGTCATCAATCAGTTCATTCCGGCAACAACATACTGAGAGAACAAATGCAAAGTTTAGAAAGAGTTGTCACAACAATGACCCTATAACTGAAGAACCGAGGTCTAGTGGATGCCAGATTGCAGATGATGACCTGCTGGTTTCAGCTATTTTCAAGAAAACAGGTTTCATCTCAAAGACAACTCAGGGTGAATCTAAATCTAAATCCTACAAATCAAGAGCTCAGAGAAAGCTGAAAAGGCAAAAGGGTCATTGCAGGTTGCTACCAAGGAACCCTGGCAATGGAGGGAAGCGCGTTAGGGAAGTCAAGAGGTGTTATCTTGGGGCAAGAACAGTGCTATCATGGTTGATTGATAATGGGATCTTATCCATAAATGATGTGATTCAATACCGAAACCTTAAAGATAATGCTGTCATTAAGGATGGTAGGATTACCGGGGATGGTATTATATGTAAGTGTTGCAATAAGTTGCTTACATTATCTGAGTTCAAGTATCATGGTGGGGATAGATTAAATCGCCCTTGCTTGAACCTTTTTATGGGGTCTGGTCAGCCTTTTACATTGTGCCTGCTTGAAGCTTGGTCTGCTGAATACAAGGCCAGGAAAAGTGGGAATCAAACCATGAAAGAAGACGATGATGATAAAAATGATGACTCCTGTGGATTGTGTGGTGATGGCGGTGAGTTGATATGCTGTGATAACTGTCCATCAGCTTTTCATCTTGCTTGTTTGTCCGTTCAGGATATCCCTGAAGGCAACTGGTACTGCACAAACTGCACTTGTCAGATTTGTCAGAATTTTGTCAATGACAAAGAGGCTCCTGGTGCTCGTGATGCACTGCAATGTTTACAGTGTGAACGTAAATATCATGAAAAGTGTCTGAGTGGAGGCAGTAAACCAGAAGGGGAAGTTTCTGACAGTTGGTATTGTGGCCGACGCTGTCAAGAGGTATACACTGGTCTTCAGTCACGGGTTGGACTTGTTAATCACATTGATGGTGGCCTCTCATGGATGCTTCTTAGATGCATCCAAGATGACCAAAAGGTTCATTCTGCCCAGTGGTTAGCCCTCAAGGCGCTATGCAATACAAAATTAGCTGTTGCCCTTACCATCATGGAGGAGTGTTTTTTGTCAATGGTGGATCCTAGAACAGGCATAGACATGATACCCCATGTTTTATACAACTGGGGGTCCGATTTTGCTCGCCTGAATTTTCAAGGGTTTTACACTGCAGTATTGGAGAAAAAGGATGTCTTAATTTCAGCAGCATCTATCAGGGTGCATGGAACTACAGTTGCAGAGATGCCACTTATTGCAACTTGCAGTAGGTATCGTCGGCAGGGAATGTGCCGACTCCTTTTGAGTGCAATTGAAGAGATGTTAATATCTGTCAAGGTAGCAAAGCTTGTGATAGCAGCCATTCCAGATTTAGTTGAGACTTGGACCAATGGCTTTGGATTCAAACCTTTAGGTGATGATGAAAGGCAGAAACTGAACAAAATAAACTTGATGGTTTTTCCTGGGACTGTATTACTTGAAAAACCCTTGTTCAAGGAAGATAAAGCAGAAGGAATGGCGATGACTGAATCATTGCAGCAAGATGTTGGAGGCACATCTGCTGATGAAATTGGTACGAAGTCAGACGCCGGACTTGGTTGCAGCAAGAATGACAGAGATTGCAGAATTGAATCACTGCCGCAAGATGTAGAAAACAATTCTACTGATGAACTTAGTAACAAGTCAAAAACGGAACATGTTTGCGGCAAGAATTTCCCAGATTACAGAGCTGAGCCACCTTTAGGATTGAAAGAACCAGCAGATTCGAGTACCTATTTAAGTGGAGAGAAGATCATGGGCTTTGTAAACAATATGCAGGAATTGAGAATTAACGGCAAAATGGACTCCACAAATGAGTCTGTGCAGCACTCTAGTGGGAACTGTTGCATGAACAAAGACGGTACCGAATCAGTAGTAAGAATTGTTGAGAACAGAAATATCAAAGCGGGTGAAGGTCAGGAGAATGGCTTGTGGGGCCCTTTTTTGCAAATGTCCTGCAAAGCAGCATTAGGCAACAATTTTGACGTGGATTCCATAATTGAATCCTCCGGGATGTATGATGAAACACAGCTCTCTTTGGAACAGAACTCGCAGGAGGCATGTGAAATGATGAATGAATGA 4407 0.413 MIQNKEIEDLYDDSFEGSNDERRIFTEVFFSKDSVQPSQRCLVTGVINFECESSKNTNISLCSSNENSVLTSPSSSKVTHSEDDCDVVQNFNETALDSVPERFNYEGPNHEDVNVKRMKFSLHQLPCSRSNFKKVLNSPTLLKEYVTDVSGAVTDFDSKPLSLRLVESSKNGVISSCYLLRHSMMLNKKRAKDGVDVSNCKKTSADGNLAKEVATSKVTASPVSQESFANRLAVTSSSITAVEKSGSHLQLEEMPKGSLSYVVDKSNLSLTPELKKDPRDLLHYRCVQLLMMAGWSIEKRKRPCRRYFESVYWTPEGRPVREFIKAWRLCGQFLSADKYNSMQDNCKEWTDISQFWSDLSSALINVEKAMSQSEPAAMLAYQWWLLDPFVVVIFVKRKIGALKKGELVRVSRSIVSRNYRMACTTKSSTWKDTSAARFDLKHDSAFLFDSATATTSLLNYHASNQKTGDGNNVGYEQTINGVIKLPIYESNSIINQEEMYLEHNADGIGNQCRKVSVYERSSLGVGLLPDDGLGFTGTRSSACTSNVTITSGNSNQVFRGLEVNTSLESNVRNFESSDQKYSENLLETSKIVDGDVLMGEAEEKDPLNGKVQDLCGSYLEEDLNRYPHGPRRGLVHCPASEAVQQSEYGEEGGEKGSRASVQTVVETANTCSTPDVTLKKKIRRKCKRVSEIKLSMLYESDMMGSTVTDEFQLTNGDLCGNHLELEEGEHVVDNAEDRGVHRKLSSISSFRQQHTERTNAKFRKSCHNNDPITEEPRSSGCQIADDDLLVSAIFKKTGFISKTTQGESKSKSYKSRAQRKLKRQKGHCRLLPRNPGNGGKRVREVKRCYLGARTVLSWLIDNGILSINDVIQYRNLKDNAVIKDGRITGDGIICKCCNKLLTLSEFKYHGGDRLNRPCLNLFMGSGQPFTLCLLEAWSAEYKARKSGNQTMKEDDDDKNDDSCGLCGDGGELICCDNCPSAFHLACLSVQDIPEGNWYCTNCTCQICQNFVNDKEAPGARDALQCLQCERKYHEKCLSGGSKPEGEVSDSWYCGRRCQEVYTGLQSRVGLVNHIDGGLSWMLLRCIQDDQKVHSAQWLALKALCNTKLAVALTIMEECFLSMVDPRTGIDMIPHVLYNWGSDFARLNFQGFYTAVLEKKDVLISAASIRVHGTTVAEMPLIATCSRYRRQGMCRLLLSAIEEMLISVKVAKLVIAAIPDLVETWTNGFGFKPLGDDERQKLNKINLMVFPGTVLLEKPLFKEDKAEGMAMTESLQQDVGGTSADEIGTKSDAGLGCSKNDRDCRIESLPQDVENNSTDELSNKSKTEHVCGKNFPDYRAEPPLGLKEPADSSTYLSGEKIMGFVNNMQELRINGKMDSTNESVQHSSGNCCMNKDGTESVVRIVENRNIKAGEGQENGLWGPFLQMSCKAALGNNFDVDSIIESSGMYDETQLSLEQNSQEACEMMNE 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00015 1468 MobiDBLite consensus disorder prediction 1318 1333 - -
Pral4746g00015 1468 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1110 1235 IPR016181 -
Pral4746g00015 1468 CDD PHD1_AIRE 963 1002 - -
Pral4746g00015 1468 PANTHER PHD FINGER FAMILY PROTEIN 4 1330 - -
Pral4746g00015 1468 SUPERFAMILY FYVE/PHD zinc finger 951 1003 IPR011011 -
Pral4746g00015 1468 MobiDBLite consensus disorder prediction 756 771 - -
Pral4746g00015 1468 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1098 1260 IPR000182 GO:0016747
Pral4746g00015 1468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1005 1062 IPR013083 -
Pral4746g00015 1468 Pfam PHD-finger 963 1004 IPR019787 -
Pral4746g00015 1468 Pfam Tify domain binding domain 885 935 IPR032308 -
Pral4746g00015 1468 MobiDBLite consensus disorder prediction 1313 1333 - -
Pral4746g00015 1468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 953 1004 IPR013083 -
Pral4746g00015 1468 CDD PHD_SF 1003 1057 - -
Pral4746g00015 1468 ProSiteProfiles Zinc finger PHD-type profile. 960 1005 IPR019787 -
Pral4746g00015 1468 SMART PHD_3 1004 1058 IPR001965 -
Pral4746g00015 1468 SMART PHD_3 962 1003 IPR001965 -
Pral4746g00015 1468 MobiDBLite consensus disorder prediction 748 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00015 Pral-Chr4746 48026 56248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00015 1 412 PHD Transcription Factor Family AT3G14980 37.349 9.37e-57 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pral4746g00015 TDBD 1.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00015 - - pcin:129315189 2358.95