Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00012 ATGTTCGATTGCATGCATTGCAGCACTGGGTTCGATCCATTGGAGCCCCTGAATTACATTGTGATGAGTTGTTTCTCTTGTATTATCAGAAAAAAGGGATGTGTCTCAGCCACACAACCAACCGAAATTGATCTTGAGGTTTCAGACATTCAGAATGTAAACCTTTACACCTACAAGGAACTCCGAATTGCCACAGAACGTTTTAGCCCAGAAAACAAGATAGGGCAAGGCGGTTTCGGATCTGTCTATAAGGGAAAACTGAGAGATGGGACTCTTGCTGCTATAAAGGTGCTATCAGCTGACTCGCATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACCAGCATAGAGCATGAGAACCTAGTTAAGTTGTTCGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCCTAGCTCAAACACTTATTGGTGGAGGCCATAGTAACATTCCATTCAGTTGGCCTGTGCGGCGGAACATTTGCATCGGCGTGGCCCGAGGCCTAGCATTCCTTCATGAGGAGGTTGAACCACATATTATCCATAGAGACATTAAAGCAAGCAATATACTACTTGATAAAGACCTGCAGCCCAAAATTTCTGATTTTGGTCTGGCAAAGCTTCTTTCGCCAAACTTGACCCATATCAGTACACGTGTTGCTGGTACAGCTGGTTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAGATCAGATGTGTACAGTTTTGGAGTTCTACTATTAGAAATTGTTAGTGGGAGGTGTAACACAAATAGACGGTTACCTCCTGAAGAACATTATCTTCTTCCAAAGGCATGGACTATGTATGAAAGTGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGACAACTTTAATATTGAGGAGGCATGCCAGTTTTGTAAAATCGGTCTTCTCTGCGCTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTACTGTGCTTGGCATGTTGATGGGTGAAATTGACGTTGATGAAAAGAAAATTACAAAGCCAGGATTACTGTTTGAGTTTGTCGAATCCAAAGATGAAAAGATGCAAAAAGCTGAGGCTGAAGTGGAAAATACGTCTTCCCTTGGCATCACAGGGAAGCAAGATGTTTCCTCTTTGACAGAGACCACGGCCTCTTTTGCTACCATGACCTTCACTTCAATTTATGATCGGAGCTGTTAA 1236 0.4353 MFDCMHCSTGFDPLEPLNYIVMSCFSCIIRKKGCVSATQPTEIDLEVSDIQNVNLYTYKELRIATERFSPENKIGQGGFGSVYKGKLRDGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSNIPFSWPVRRNICIGVARGLAFLHEEVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLLSPNLTHISTRVAGTAGYLAPEYAIRSQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPPEEHYLLPKAWTMYESGELEKLVDALLEDNFNIEEACQFCKIGLLCAQDSPQLRPSMSTVLGMLMGEIDVDEKKITKPGLLFEFVESKDEKMQKAEAEVENTSSLGITGKQDVSSLTETTASFATMTFTSIYDRSC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00012 411 CDD STKc_IRAK 74 341 - -
Pral4746g00012 411 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Pral4746g00012 411 ProSiteProfiles Protein kinase domain profile. 68 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00012 411 Pfam Protein kinase domain 70 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00012 411 SMART serkin_6 68 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00012 411 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 33 373 - -
Pral4746g00012 411 Gene3D Phosphorylase Kinase; domain 1 39 143 - -
Pral4746g00012 411 SUPERFAMILY Protein kinase-like (PK-like) 52 346 IPR011009 -
Pral4746g00012 411 Coils Coil 360 380 - -
Pral4746g00012 411 FunFam cold-responsive protein kinase 1 39 143 - -
Pral4746g00012 411 FunFam Putative LRR receptor-like serine/threonine-protein kinase 144 351 - -
Pral4746g00012 411 Gene3D Transferase(Phosphotransferase) domain 1 144 352 - -
Pral4746g00012 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00012 Pral-Chr4746 33021 35959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00012 56 345 Receptor kinase-like Gene Family AT1G53430 56.207 5.70e-104 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00012 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00012 - - gmx:100797257 598.201