Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00011 ATGTTCGATTGCATGCATTGCAGCACTGGGTTCGATCCATTGGAGCCCCTGAATTACATTGTGATGAGTTGTTTCTCTTGTATTATCAGAAAAAAGGGATGTGTCTCAGCCACACAACCAACCGAAATTGATCTTGACATTCAGAATGTAAACCTTTACACCTACAAGGAACTCCGAATTGCCACAGAACGTTTTAGCCCAGAAAACAAGATAGGGCAAGGCGGTTTCGGATCTGTCTATAAGGGAAAACTGAGAGATGGGACTCTTGCTGCTATAAAGGTGCTATCAGCTGACTCGCATCAAGGGGTTCGGGAATTCCTGACAGAAATCAAGGTGATCACCAGCATAGAGCATGAGAACCTAGTTAAGTTGTTCGGATGCTGTGTGGAAGGAAATCACAGGATTTTGGTGTATGGCTATCTTGAAAACAACAGCCTAGCTCAAACACTTATTGGTGGAGGCCATAGTAACATTCCATTCAGTTGGCCTGTGCGGCGGAACATTTGCATCGGCGTGGCCCGAGGCCTAGCATTCCTTCATGAGGAGGTTGAACCACATATTATCCATAGAGACATTAAAGCAAGCAATATACTACTTGATAAAGACCTGCAGCCCAAAATTTCTGATTTTGGTCTGGCAAAGCTTCTTTCGCCAAACTTGACCCATATCAGTACACGTGTTGCTGGTACAGCTGGTTATCTAGCGCCTGAGTATGCAATACGAAGTCAAGTAACAAGAAGATCAGATGTGTACAGTTTTGGAGTTCTACTATTAGAAATTGTTAGTGGGAGGTGTAACACAAATAGACGGTTACCTCCTGAAGAACATTATCTTCTTCCAAAGGCATGGACTATGTATGAAAGTGGGGAGCTGGAGAAACTGGTGGATGCATTGCTAGAAGACAACTTTAATATTGAGGAGGCATGCCAGTTTTGTAAAATCGGTCTTCTCTGCGCTCAGGATTCTCCTCAGCTCCGACCATCAATGTCTACTGTGCTTGGCATGTTGATGGGTGAAATTGACGTTGATGAAAAGAAAATTACAAAGCCAGGATTACTGTTTGAGTTTGTCGAATCCAAAGATGAAAAGATGCAAAAAGCTGAGGCTGAAGTGGAAAATACGTCTTCCCTTGGCATCACAGGGAAGCAAGATGTTTCCTCTTTGACAGAGACCACGGCCTCTTTTGCTACCATGACCTTCACTTCAATTTATGATCGGAGCTGTTAA 1227 0.4352 MFDCMHCSTGFDPLEPLNYIVMSCFSCIIRKKGCVSATQPTEIDLDIQNVNLYTYKELRIATERFSPENKIGQGGFGSVYKGKLRDGTLAAIKVLSADSHQGVREFLTEIKVITSIEHENLVKLFGCCVEGNHRILVYGYLENNSLAQTLIGGGHSNIPFSWPVRRNICIGVARGLAFLHEEVEPHIIHRDIKASNILLDKDLQPKISDFGLAKLLSPNLTHISTRVAGTAGYLAPEYAIRSQVTRRSDVYSFGVLLLEIVSGRCNTNRRLPPEEHYLLPKAWTMYESGELEKLVDALLEDNFNIEEACQFCKIGLLCAQDSPQLRPSMSTVLGMLMGEIDVDEKKITKPGLLFEFVESKDEKMQKAEAEVENTSSLGITGKQDVSSLTETTASFATMTFTSIYDRSC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00011 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Pral4746g00011 408 CDD STKc_IRAK 71 338 - -
Pral4746g00011 408 SMART serkin_6 65 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00011 408 FunFam Putative LRR receptor-like serine/threonine-protein kinase 141 348 - -
Pral4746g00011 408 ProSiteProfiles Protein kinase domain profile. 65 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00011 408 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Pral4746g00011 408 Pfam Protein kinase domain 67 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4746g00011 408 FunFam cold-responsive protein kinase 1 36 140 - -
Pral4746g00011 408 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 370 - -
Pral4746g00011 408 Gene3D Phosphorylase Kinase; domain 1 35 140 - -
Pral4746g00011 408 Coils Coil 357 377 - -
Pral4746g00011 408 Gene3D Transferase(Phosphotransferase) domain 1 141 349 - -
Pral4746g00011 408 SUPERFAMILY Protein kinase-like (PK-like) 49 343 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00011 Pral-Chr4746 33021 35959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00011 45 342 Receptor kinase-like Gene Family AT1G53430 55.705 2.33e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4746g00011 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00011 - - gmx:100797257 590.497