Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00007 ATGGGATCACCATTGGAGCCAGTTTCATGTCCCAGAAAAACCCCATTTAGAATAGAAACCAAGAACTTATCATGCAGATTGCGCAGCCAGCTTGATGAGTTCAGAAGTCTGTTTTTTGGTTCAAGTCCAAGGAGCAGTGCTAAGCTGATCTTAAAAGATGTAAATTGTGAGGCCAAACCTGGAGAACTCACAGTTATTGCTGGTCCTAGTGGAGCTGGAAAGACCACACTGCTAGAGATTCTTGCAGGGAGAGTATCCCTATGTGAGGTTTCAGGGCAAGTTCTTGTCAATCATAGGCCCATGGACTTAAAGCAATTCAGAAGAACATGTGGGTATGTCACACAAGAAGATACATTGTTCCCTTCGCTTACAGTTAGAGAAACACTCATGTATAGTGCACTTCTGAGGCTTCCTGGGGGGAGAAAAGTGGCTGCTGCAAGAGTTGCAGGGTTGATGAAGGAGCTTGGGTTGGATCACATTGCAGATTCAAGAATTGGTACTGGTCGTGGTGGATCATCAGACCAAGGTATATCAGGTGGGGAAAGGCGAAGAGTTTCCATCGGAGTTGATTTGGTTCATGACCCTGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCTGCGCTGAACATAGTCTCAATGCTTAGATTAATGGCATTTAATCAAGGTAAGACTATCGTTTTAACCATTCACCAACCTGGGTTTCGGATTTTACAGCTGGTTGATCATCTTGTTCTGCTCTCGGATGGATTTGTCATGCATAATGGGTCACTGAATCTTCTTGAGGCTAGGCTCAAGTTGGCTGGGCATCATATTCCACATCATGTCAATGTCCTTGAATTTGCCCTTGATGTCATGGGATGCTTGGTGATACAAACTTCAGAATCTAGGAACAATCAACTTCTTCTCAGAGACAGGGAGGAACAAGTTTGTAAAATGAGAATGCCGTGCTCATTGTATGTCAGAGAAAAGGCTGTTCAGTACCCAAATTCTCCAGTGGAGGAGATTCTAATCCTAGGACAAAGGTTTTGCTGCAACATATTCAGAACCAAGCAACTGTTCGTCACCAGAGTCATACAAGCCTTAGTAGCTGGATTTATACTAGGGACTATATTTTTTAATGTTGGCAACCGAGAAGGCCAAGTTGCCTTACAGACACGAAGTGGATTTTTTGCTTTCAGCCTTACCTTTTTGTTATCTTCGACAACAGAAGGCCTGCCTATTTTCTTGCAAGAGAAAAGGACTTTGATGAAAGAGACCTCAAGAGGAGCTTATAGAGTATCTTCATATGTTCTAGCAAACACACTAGTGTTTCTTCCTTTCCTTTTGATGGTTGGTCTTCTATATTCTACTCCAGTTTATTGGCTGGTAGGTTTAAGGAAGGAAATAGATGGGTTCCTATACTTTTCTCTGGTTGTTTGGTTGGTGGTCCTCATGTCAAATTCTCTTGTAGCTTGTTTCAGTGCTCTGGTGCCAAATTTCATCCTGGGAACGTCAGTGATTGCAGGGTTAATGGGTTCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGGAAACATACCCAGATACTGGATTTTCATGCACTATATAAGTCTATTCAAGTACCCATTCGAGTGTTTTATGATAAATGAATATGGAGGAAAACAAGGGAAAGCCAGATGCCTAGAGAATAGGAATGGAGAATGCAGTTTATCTGGAGATGAGTTCTTAAGACAGCAAGGTCTGAGAGAGTCCCAAAGATGGAGTAATTTGGCTGTGATATTGAGTTTCATAATTGGGTATAGAGTGCTATGCTTTTTGATTCTGTGGTATAGATGCCACAGAACTAGAAAATAA 1851 0.4176 MGSPLEPVSCPRKTPFRIETKNLSCRLRSQLDEFRSLFFGSSPRSSAKLILKDVNCEAKPGELTVIAGPSGAGKTTLLEILAGRVSLCEVSGQVLVNHRPMDLKQFRRTCGYVTQEDTLFPSLTVRETLMYSALLRLPGGRKVAAARVAGLMKELGLDHIADSRIGTGRGGSSDQGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNIVSMLRLMAFNQGKTIVLTIHQPGFRILQLVDHLVLLSDGFVMHNGSLNLLEARLKLAGHHIPHHVNVLEFALDVMGCLVIQTSESRNNQLLLRDREEQVCKMRMPCSLYVREKAVQYPNSPVEEILILGQRFCCNIFRTKQLFVTRVIQALVAGFILGTIFFNVGNREGQVALQTRSGFFAFSLTFLLSSTTEGLPIFLQEKRTLMKETSRGAYRVSSYVLANTLVFLPFLLMVGLLYSTPVYWLVGLRKEIDGFLYFSLVVWLVVLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKGNIPRYWIFMHYISLFKYPFECFMINEYGGKQGKARCLENRNGECSLSGDEFLRQQGLRESQRWSNLAVILSFIIGYRVLCFLILWYRCHRTRK 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00007 616 Pfam ABC transporter 51 205 IPR003439 GO:0005524
Pral4746g00007 616 CDD ABCG_EPDR 41 260 - -
Pral4746g00007 616 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 601 - -
Pral4746g00007 616 FunFam ABC transporter G family member 10 35 284 - -
Pral4746g00007 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 270 IPR027417 -
Pral4746g00007 616 Pfam ABC-2 type transporter 339 550 IPR013525 GO:0016020|GO:0140359
Pral4746g00007 616 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524|GO:0016887
Pral4746g00007 616 Gene3D - 18 279 IPR027417 -
Pral4746g00007 616 SMART AAA_5 60 255 IPR003593 GO:0016887
Pral4746g00007 616 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 278 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00007 Pral-Chr4746 30567 32537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00007 31 265 Calmodulin-binding Proteins AT2G36910 29.555 3.27e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00007 K05681 - gmx:100776372 986.482