Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4746g00001 ATGATTAGCGGGGGTGTATGCAGTTTCCGAATGTGTTGCTCGCATCTCCATTGCTTCTCAGAGAAATCTCTACTCCGACCAGCTCGGTTCTCTTTCACTTGCCGCCGCCGCCTTTTGGCCACCGCATCCTCGTTTTCTGGCGCCAATAAGAAGGACACCAAAGAGAAGGTCATCGTCATTTCTGGCCCCACTGGGTCTGGTAAAAGCCGCCTTGCTTTAGAGCTGGCGAAGCGGCTCAATGGTGAAATTATCAGTGCGGATTCTGTCCAGGTGTACCAGGGTCTTGATGTTGGATCAGCAAAGCCCTCCAAAAATGATAGAAAGGAAGTACCGCATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTGGGGCGATTTTTTGAGGATGCAAGGCAAGCTACAAGATGCATTCTTGATAATGGTCACGTTCCTATTGTTGTTGGGGGAACTGGATTATACTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAGGCCTCTCCAGAGACTACATCTGAAGCGTATTTGGCTTTGGGTGAGTTAGAGAGAAATGGGCAATGGGATGCAGCTGTGCAGTTGGTTGTAGAAGCAGGTGACCCAAAGGCACAATTTATAACTCCCAATGACTGGTATCGATTGCGACGAAGCCTTGAGATTATTAAGTCTAGTGGATCACCTCCGTCTGCTTTTGGGGTACCATATGAATTTTTCAGGGAACAGGGAGATGCTAGTGTTATGGACAACTCTGGCTGTTCTGATGGCAATGCTAATTGCGCTGGAATGAAAGAAACATCCTCAAATTTGGACTATGAGTTCATGTGTTTTTTCCTTTCTACGCGAAGGCTTGACCTCTATAGATCAATTGATTACCGCTGCGAAGATATGCTATTAGAGAGGGATGGCTTATTGTCTGAGGCTCAATGGCTTCTTAATGTTGGTCTTCATCCTAATTCAAATTCAGCGACAAAAGCAATTGGTTACAGGCAGGCCATGGACTACTTAGTAAGATGCAGAGAGCAAGGGGGTCAGAGTTCAGTTCGAGAATTCTTCTATTTTTTAACTGAATTTCAGAAGGCATCTAGGAATTTTGCCAAAAGACAGCTGACATGGTTTCGAAATGAACATATATACCACTGGCTTGATGCTTCTAGACGTCTGGACACCATTCTAGACTTTATCTACAGATCTTACCATGATAACACTGGAGCTGTCATTGTTCCTGAACACTTGAGAATGTCTAGAGATGCTTCTAACGGTCGAGAAGCTAATGAACTAAAGGCCTACCGCAGCAAAAATAGGCTTTTCTTGAATAAAGACGATTGCTCTCCTGTTCTGGAGTGGATAAGGAGAACTCAAGGCTGA 1374 0.4476 MISGGVCSFRMCCSHLHCFSEKSLLRPARFSFTCRRRLLATASSFSGANKKDTKEKVIVISGPTGSGKSRLALELAKRLNGEIISADSVQVYQGLDVGSAKPSKNDRKEVPHHLVDILHPSEDYSVGRFFEDARQATRCILDNGHVPIVVGGTGLYLRWFIYGKPDVPKASPETTSEAYLALGELERNGQWDAAVQLVVEAGDPKAQFITPNDWYRLRRSLEIIKSSGSPPSAFGVPYEFFREQGDASVMDNSGCSDGNANCAGMKETSSNLDYEFMCFFLSTRRLDLYRSIDYRCEDMLLERDGLLSEAQWLLNVGLHPNSNSATKAIGYRQAMDYLVRCREQGGQSSVREFFYFLTEFQKASRNFAKRQLTWFRNEHIYHWLDASRRLDTILDFIYRSYHDNTGAVIVPEHLRMSRDASNGREANELKAYRSKNRLFLNKDDCSPVLEWIRRTQG 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4746g00001 457 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 54 383 IPR039657 -
Pral4746g00001 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 176 IPR027417 -
Pral4746g00001 457 Pfam IPP transferase 90 378 - -
Pral4746g00001 457 Gene3D - 165 235 - -
Pral4746g00001 457 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 57 234 IPR018022 GO:0008033
Pral4746g00001 457 Gene3D - 54 444 IPR027417 -
Pral4746g00001 457 FunFam tRNA dimethylallyltransferase 9 165 236 - -
Pral4746g00001 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 365 IPR027417 -
Pral4746g00001 457 Hamap tRNA dimethylallyltransferase [miaA]. 57 395 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4746g00001 Pral-Chr4746 8823 15176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4746g00001 60 338 C2H2 Transcription Factor Family AT2G27760 27.178 8.88e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4746g00001 K00791 - qsa:O6P43_029165 692.189