Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4742g00006 ATGGAAGCAAGAGAAGGAATCAGTTCAGGGGTTACGGTAATTGGAGCGGAAGCTCCCTCAGCCTATCATGTGGCACCAAGAACTGAGGCTCCGAGCCAGACTCAAGTTCCTGCTGCACCAGCAGCACCAAATGTTGGTGCTTCACCAGTGAGTGTGGGAATGGATGGAACAGCAGTCAAGAAGAAACGAGGTAGACCAAGGAAGTATGGTCCCGACGGGTCTGTGGCTATGGCATTGTCACCTTTGCCAATTTCATCTTCTGCTCCCCTTTCTAATGACTTCTCATCTGGGAAGCGGGGCAAATCAGCAGGAATGGAGTACAAGAAACATAAGAAACTTGGATTGGATCATTTGGGTGATTTGAATGCGTGCTCCCTTGGTACAAACTTCATGCCTCATATCATCACAGTCAATACTGGCGAGGATATTACAATGAAGGTTATATCTTTTTCTCAACAAGGACCCCGGGCTATATGCATCCTCTCTGCTACTGGTGTGATTTCTAATGTTACCCTACGTCAGCCTGATTCTTCAGGGGGTACTTTGACCTATGAGGGTCGCTTTGAGATACTATCGTTGTCTGGATCATTCATGCCTACTGACAACCAAGGAACAAGAAGCAGGTCAGGTGGAATGAGTGTCTCTTTGGCAAGCCCTGATGGTCGTGTTGTAGGCGGTGGGGTTGCTGGTCTTCTTATTGCTGCCAGTCCTGTGCAGGTGGTGGTGGGAAGTTTTCTACCAAGCAATCAGCAAGACCCAAAACCAAAGAAGTCCAAACCTGATTACACACCTCCGGCTACTGCTACCCCACCAACCGTCGCTGTTTCTTCTGCACCTCCCTCAACTAATGCTGAAAAGGAAGATGGCTTGGGTGGTGGACATGTCCTGCAAAATTCTGGAAACCTGAACTCCAACATAACCTCTCCCCCATCATTCCGACGAGAAAACTGGGTGAACATGCACACTATGCCAGATTTGAGACAGTCAGCTACCGACATTAACATCTCCCTGCCAGATAGCTAA 1023 0.4848 MEAREGISSGVTVIGAEAPSAYHVAPRTEAPSQTQVPAAPAAPNVGASPVSVGMDGTAVKKKRGRPRKYGPDGSVAMALSPLPISSSAPLSNDFSSGKRGKSAGMEYKKHKKLGLDHLGDLNACSLGTNFMPHIITVNTGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDNQGTRSRSGGMSVSLASPDGRVVGGGVAGLLIAASPVQVVVGSFLPSNQQDPKPKKSKPDYTPPATATPPTVAVSSAPPSTNAEKEDGLGGGHVLQNSGNLNSNITSPPSFRRENWVNMHTMPDLRQSATDINISLPDS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4742g00006 340 ProSiteProfiles PPC domain profile profile. 127 266 IPR005175 -
Pral4742g00006 340 MobiDBLite consensus disorder prediction 24 74 - -
Pral4742g00006 340 CDD DUF296 132 245 IPR005175 -
Pral4742g00006 340 MobiDBLite consensus disorder prediction 246 310 - -
Pral4742g00006 340 Gene3D - 132 259 - -
Pral4742g00006 340 MobiDBLite consensus disorder prediction 296 310 - -
Pral4742g00006 340 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 245 IPR005175 -
Pral4742g00006 340 FunFam AT-hook motif nuclear-localized protein 1-like 132 262 - -
Pral4742g00006 340 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 303 IPR039605 GO:0003680
Pral4742g00006 340 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 248 - -
Pral4742g00006 340 MobiDBLite consensus disorder prediction 269 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4742g00006 Pral-Chr4742 70197 76392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4742g00006 10 270 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.770 2.14e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4742g00006 - - gmx:100796830 494.967