Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4742g00005 ATGGATTGTGGGTGTAGTAAGAATAATAAGAATGGCGGGGATGGTGGTGATCATGGTGGTCAGAGAGGGCCTTGTGGGGCGTGCAAGTTCCTTCGACGAAAATGCGTGAGGGGATGCGTGTTTGCACCCTACTTCGACTCCGATCAAGGCACGGCTCACTTCGCGGCAGTGCACAAGGTATTCGGAGCCAGCAACGCCGCCAAGCTTCTGCTGCGAATCCCTCCTCACCACCGTCTGGACGCCGTCATCACTCTCTCCTACGAGGCTCTCTCTAGGGCTCGAGATCCCGTCTATGGCTGCGTCGCCCACATCTTCGCCCTTCAACAACAGGTGATGAACTTGCAGGCAGAGTTAGCTTATGTGCAAGCTCGTCTTTCAACACTGCAGCGTCTGCCAGCGGCAGGGGTCGGAGCTCTACCTCATCAACTTCAAACCTCATCTTCTACCAATGAGTTTGCCTTTGATCCAACTAATTCATTTCAGTTCCCAACT 492 0.5386 MDCGCSKNNKNGGDGGDHGGQRGPCGACKFLRRKCVRGCVFAPYFDSDQGTAHFAAVHKVFGASNAAKLLLRIPPHHRLDAVITLSYEALSRARDPVYGCVAHIFALQQQVMNLQAELAYVQARLSTLQRLPAAGVGALPHQLQTSSSTNEFAFDPTNSFQFPT 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4742g00005 164 PANTHER LOB DOMAIN CONTAINING PROTEIN 21 136 - -
Pral4742g00005 164 Coils Coil 111 131 - -
Pral4742g00005 164 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Pral4742g00005 164 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4742g00005 Pral-Chr4742 43746 55114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4742g00005 27 158 AS2 family AT2G45410 68.382 3.38e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4742g00005 LOB 2.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4742g00005 - - pcin:129289888 253.832