Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4742g00004 ATGAGTACGAGCTCCACCAGTAACGTTACTGGTAGTGTTGGTGGAGGAGGAGGAGGATGCGGTGGGGGAGGAGGAGGTGGTGGTGGTAGCGGCGGCGGTGGAGGGCCGTGCGGTGCCTGCAAGTTTCTGAGAAGGAAGTGCGTGCCGGGGTGTATCTTCGCGCCGTACTTCGACTCCGAGCAAGGCGCGACGCACTTCGCGGCGGTGCACAGGGTGTTCGGAGCAAGCAACGTGTCGAAGCTGCTTCTGAATATTCCGGTGCACAAGCGGCTGGACGCGGTGGTGACGATTTGCTTCGAGGCTCAGGCTCGGCTGAGAGATCCTGTGTATGGATGTGTCGCCAACATCTTCGCTCTTCAGCAACAGGTTGTGAGCCTACAAGCAGAACTTTCATACTTGCAAGGTCACCTTGCTACATTAGAGCTGCCCCAACCACCACCTCCTCCACTACCACAAGCAACACCGACGCCAACAACTCTCTCAATCGGTAACGTCCCGTCCGGCATAGCCACTTCTCTTCCGGTAACATATGATTTATCTTCTCTCTTTGATCCGATGGCCCAAAGTCCTTGGCCCTTGCCACACCGGCCCATGGATTCCCACCAATTTGGATCTAGTGGCTTACCGATAATAGGCCGTGGTAGTGGTAGTGGTAGTAGTAGCGGTAGCGGTGATCTTCATGCCCTAGCAAGAGAACTGCTCAACAGACATGGATCTCCTCCATCTTCAGCACCCATGGCTTGCTCCAAAGCTTCATCTTCATCACCATCATCACTTTCCAAATGA 786 0.5496 MSTSSTSNVTGSVGGGGGGCGGGGGGGGGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHRVFGASNVSKLLLNIPVHKRLDAVVTICFEAQARLRDPVYGCVANIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPLPQATPTPTTLSIGNVPSGIATSLPVTYDLSSLFDPMAQSPWPLPHRPMDSHQFGSSGLPIIGRGSGSGSSSGSGDLHALARELLNRHGSPPSSAPMACSKASSSSPSSLSK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4742g00004 261 MobiDBLite consensus disorder prediction 193 261 - -
Pral4742g00004 261 ProSiteProfiles LOB domain profile. 35 137 IPR004883 -
Pral4742g00004 261 PANTHER LOB DOMAIN CONTAINING PROTEIN 34 141 - -
Pral4742g00004 261 MobiDBLite consensus disorder prediction 143 163 - -
Pral4742g00004 261 MobiDBLite consensus disorder prediction 245 261 - -
Pral4742g00004 261 Pfam Lateral organ boundaries (LOB) domain 36 134 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4742g00004 Pral-Chr4742 32202 38550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4742g00004 37 244 AS2 family AT2G45420 61.927 1.26e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4742g00004 LOB 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4742g00004 K21994 - zju:107435688 286.96