Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4741g00035 ATGGACCCGATGGACATCATTGGGAAATCGAAGGAAGATGCTTCTCTTCCTAAAGCAACTATGACAAAAATTATTAAAGAAATGTTACCCCCTGATGTACGCGTTGCAAGAGATGCTCAAGATTTGTTGATTGAGTGTTGTGTAGAGTTTATAAATCTTTTGTCATCAGAGTCCAATGAAGTCTGCAGCAGAGGAGAAAAAAGGACAATTGCACCTGAGCATGTCCTGAAGGCTTTAGAGGTTCTTGGATTTGGTGAGTACATTGAGGAAGTTTATGCAGCATATGAACAGCACAAGATTGAGACCATGCACGATTCTCTAAAAGGAGGGAAATGGAGCAATGGAGCAGAAATGACGGAGGAGGAAGCTTTAGCAGAGCAGCAAAGGATGTTTGCGGAGGCACGTGCCAGAATGAATGGTGAGGCCATTGCGTCCAAGCAGCCAGATGCTGACCAAAGTTTAGAGAGCTGA 471 0.4395 MDPMDIIGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLLSSESNEVCSRGEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKIETMHDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGEAIASKQPDADQSLES 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4741g00035 156 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Pral4741g00035 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Pral4741g00035 156 Gene3D Histone, subunit A 5 146 IPR009072 GO:0046982
Pral4741g00035 156 FunFam Negative cofactor 2 beta 6 143 - -
Pral4741g00035 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4741g00035 Pral-Chr4741 271430 275578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4741g00035 1 149 CCAAT-DR1 Transcription Factor Family AT5G23090 82.550 1.30e-90 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral4741g00035 CBFD_NFYB_HMF 3.1e-21 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4741g00035 K21751 - tcc:18604965 288.115