Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4741g00032 ATGGAAAACCTAGAGATCTCATCAGAATGTCCACTTTCTTGTCAAAACTCAAACAACAGCCAATCTTTAATGCCTCATGAATCAGGTAATAAGCCCTATGTGAGCACAGAGACGAGGAAGACCAAGGTTCCAAAAAGAGCAGAGCGGAGGGTAAATGACAGTAAGTACCTTGGGGTGAGACAAAGGCCTTCAGGAAGGTGGGTCGCTGAGATCAAGGACTCCCCACAGAAGCTGAGGCTTTGGCTGGGAACTTTTGACAGAGCAGAAGACGCTGCTATGGCTTATGATTGCGCTGCTAGGCTTCTAAGAGGAAGAAATGCCAAGACAAACTTCCAGTGCCCTTCAGGGATGATCGCCAACACACATGAGGAAATCTGCAGCTTTTTGCGTAAGAATCCAAGGGCTTATCAGATTCTTAAGCATGCAATCATGAAAAACCATCATGCAGTTCTTTCTTCCACAGCCATACCTTGGAAGAACCGGATCAGTAATATTACGAGAGATGACGGATTCGACACGCTTGTTGAAGAAACTATAGTATGCTGTTCCTGTACTAGCTCTGAAGGAGGTTCTTCTTCTTCTTCTTCTTCTGGGTGTTGTGGGGTCACATTTGGGAGTTCTAAGGTTTATTCTTCTGTTGTTGTGGCTCCTTCTTTCAGCGCCTCATATTGTCAGACCGACGATGGTCAGGAAGAATGA 699 0.4549 MENLEISSECPLSCQNSNNSQSLMPHESGNKPYVSTETRKTKVPKRAERRVNDSKYLGVRQRPSGRWVAEIKDSPQKLRLWLGTFDRAEDAAMAYDCAARLLRGRNAKTNFQCPSGMIANTHEEICSFLRKNPRAYQILKHAIMKNHHAVLSSTAIPWKNRISNITRDDGFDTLVEETIVCCSCTSSEGGSSSSSSSGCCGVTFGSSKVYSSVVVAPSFSASYCQTDDGQEE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4741g00032 232 MobiDBLite consensus disorder prediction 1 37 - -
Pral4741g00032 232 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 CDD AP2 54 112 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Pral4741g00032 232 SUPERFAMILY DNA-binding domain 54 112 IPR016177 GO:0003677
Pral4741g00032 232 FunFam ethylene-responsive transcription factor RAP2-11 54 113 - -
Pral4741g00032 232 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 MobiDBLite consensus disorder prediction 1 48 - -
Pral4741g00032 232 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Pral4741g00032 232 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 42 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4741g00032 Pral-Chr4741 241703 242897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4741g00032 35 111 AP2-EREBP Transcription Factor Family AT5G19790 59.740 1.16e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4741g00032 AP2 8.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4741g00032 K09286 - gmx:100800716 231.491